Removal of transformation scripts #2775
Workflow file for this run
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| # This workflow will run test for IDMP project | |
| name: IDMP Automation Test | |
| on: | |
| push: | |
| pull_request: | |
| branches: ["master"] | |
| permissions: | |
| contents: read | |
| jobs: | |
| IDMP: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Java 11 | |
| uses: actions/setup-java@v4 | |
| with: | |
| distribution: "temurin" | |
| java-version: "11" | |
| cache: "maven" | |
| - name: Install Dependencies & Prepare IDMP Ontologies | |
| run: | | |
| ./etc/unit_tests/dependencies.sh | |
| - name: Run unit tests using Apache Jena | |
| run: | | |
| java -Xmx8G -jar etc/unit_tests/target/unit-test-runner-1.0.jar \ | |
| -ontology_location ./AboutIDMPDev-ReferenceIndividuals.ttl \ | |
| -root_folder etc/unit_tests/ \ | |
| -cq_source etc/CQ/Example/ \ | |
| -config_file configs/idmp_tests_config.yaml | |
| if [ $? != 0 ]; | |
| then | |
| exit $? | |
| fi | |
| - name: Archive merged ontology on failure | |
| uses: actions/upload-artifact@v4 | |
| if: always() | |
| with: | |
| name: merged-ontology | |
| path: AboutIDMPDev-ReferenceIndividuals.ttl |