Add test for various use cases of StructuredInterpolation2D with limiter #1261
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: build | |
| # Controls when the action will run | |
| on: | |
| # Trigger the workflow on all pushes, except on tag creation | |
| push: | |
| branches: | |
| - '**' | |
| tags-ignore: | |
| - '**' | |
| # Trigger the workflow on all pull requests | |
| pull_request: ~ | |
| # Allow workflow to be dispatched on demand | |
| workflow_dispatch: ~ | |
| env: | |
| ATLAS_TOOLS: ${{ github.workspace }}/tools | |
| CTEST_PARALLEL_LEVEL: 1 | |
| CACHE_SUFFIX: v1 | |
| jobs: | |
| ci: | |
| name: ci | |
| strategy: | |
| fail-fast: false # false: try to complete all jobs | |
| matrix: | |
| build_type: [Release,Debug] | |
| name: | |
| - linux gnu-10 | |
| - linux gnu-12 | |
| - linux gnu-7 | |
| - linux clang-12 | |
| # - linux nvhpc-22.11 | |
| - linux intel | |
| - linux intel-classic | |
| - macos | |
| include: | |
| - name: linux gnu-10 | |
| os: ubuntu-20.04 | |
| compiler: gnu-10 | |
| compiler_cc: gcc-10 | |
| compiler_cxx: g++-10 | |
| compiler_fc: gfortran-10 | |
| caching: true | |
| coverage: true | |
| - name: linux gnu-12 | |
| os: ubuntu-22.04 | |
| compiler: gnu-12 | |
| compiler_cc: gcc-12 | |
| compiler_cxx: g++-12 | |
| compiler_fc: gfortran-12 | |
| cmake_options: -DENABLE_OMP_CXX=OFF | |
| caching: true | |
| coverage: false | |
| - name: linux gnu-7 | |
| os: ubuntu-20.04 | |
| compiler: gnu-7 | |
| compiler_cc: gcc-7 | |
| compiler_cxx: g++-7 | |
| compiler_fc: gfortran-7 | |
| caching: true | |
| coverage: false | |
| - name: linux clang-12 | |
| os: ubuntu-20.04 | |
| compiler: clang-12 | |
| compiler_cc: clang-12 | |
| compiler_cxx: clang++-12 | |
| compiler_fc: gfortran-10 | |
| caching: true | |
| coverage: false | |
| - name: linux clang-12 | |
| build_type: Release | |
| os: ubuntu-20.04 | |
| compiler: clang-12 | |
| compiler_cc: clang-12 | |
| compiler_cxx: clang++-12 | |
| compiler_fc: gfortran-10 | |
| ctest_options: "-LE mpi" # For now until Checkerboard fixed | |
| caching: true | |
| coverage: false | |
| # - name: linux nvhpc-22.11 | |
| # os: ubuntu-20.04 | |
| # compiler: nvhpc-22.11 | |
| # compiler_cc: nvc | |
| # compiler_cxx: nvc++ | |
| # compiler_fc: nvfortran | |
| # cmake_options: -DCMAKE_CXX_FLAGS=--diag_suppress177 | |
| # ctest_options: "-LE mpi" # For now until Checkerboard fixed | |
| # caching: false | |
| # coverage: false | |
| - name : linux intel | |
| os: ubuntu-20.04 | |
| compiler: intel | |
| compiler_cc: icx | |
| compiler_cxx: icpx | |
| compiler_fc: ifx | |
| caching: true | |
| coverage: false | |
| - name : linux intel-classic | |
| os: ubuntu-20.04 | |
| compiler: intel-classic | |
| compiler_cc: icc | |
| compiler_cxx: icpc | |
| compiler_fc: ifort | |
| caching: true | |
| coverage: false | |
| - name: macos | |
| # Xcode compiler requires empty environment variables, so we pass null (~) here | |
| os: macos-14 | |
| compiler: clang-15 | |
| compiler_cc: ~ | |
| compiler_cxx: ~ | |
| compiler_fc: gfortran-13 | |
| caching: true | |
| coverage: false | |
| cmake_options: -DMPI_SLOTS=4 | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - name: Checkout Repository | |
| uses: actions/checkout@v2 | |
| - name: Set up Homebrew | |
| id: set-up-homebrew | |
| uses: Homebrew/actions/setup-homebrew@master | |
| - name: Environment | |
| run: | | |
| echo "DEPS_DIR=${{ runner.temp }}/deps" >> $GITHUB_ENV | |
| echo "CC=${{ matrix.compiler_cc }}" >> $GITHUB_ENV | |
| echo "CXX=${{ matrix.compiler_cxx }}" >> $GITHUB_ENV | |
| echo "FC=${{ matrix.compiler_fc }}" >> $GITHUB_ENV | |
| if [[ "${{ matrix.os }}" =~ macos ]]; then | |
| export HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK=1 | |
| export HOMEBREW_NO_AUTO_UPDATE=1 | |
| export HOMEBREW_NO_INSTALL_CLEANUP=1 | |
| echo "HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK=1" >> $GITHUB_ENV | |
| echo "HOMEBREW_NO_AUTO_UPDATE=1" >> $GITHUB_ENV | |
| echo "HOMEBREW_NO_INSTALL_CLEANUP=1" >> $GITHUB_ENV | |
| brew install ninja | |
| brew install libomp | |
| else | |
| sudo apt-get update | |
| if [[ "${{ matrix.compiler }}" =~ gnu-7 ]]; then | |
| sudo apt-get install gcc-7 g++-7 gfortran-7 | |
| fi | |
| sudo apt-get install ninja-build | |
| fi | |
| printenv | |
| - name: Cache Dependencies | |
| # There seems to be a problem with cached NVHPC dependencies, leading to SIGILL perhaps due to slightly different architectures | |
| if: matrix.caching | |
| id: deps-cache | |
| uses: pat-s/[email protected] | |
| with: | |
| path: ${{ env.DEPS_DIR }} | |
| key: deps-${{ matrix.os }}-${{ matrix.compiler }}-v1 | |
| - name: Install NVHPC compiler | |
| if: contains( matrix.compiler, 'nvhpc' ) | |
| shell: bash -eux {0} | |
| run: | | |
| ${ATLAS_TOOLS}/install-nvhpc.sh --prefix ${DEPS_DIR}/nvhpc --version 22.11 | |
| source ${DEPS_DIR}/nvhpc/env.sh | |
| echo "${NVHPC_DIR}/compilers/bin" >> $GITHUB_PATH | |
| [ -z ${MPI_HOME+x} ] || echo "MPI_HOME=${MPI_HOME}" >> $GITHUB_ENV | |
| - name: Install Intel oneAPI compiler | |
| if: contains( matrix.compiler, 'intel' ) | |
| run: | | |
| ${ATLAS_TOOLS}/install-intel-oneapi.sh | |
| source /opt/intel/oneapi/setvars.sh | |
| printenv >> $GITHUB_ENV | |
| echo "CACHE_SUFFIX=$CC-$($CC -dumpversion)" >> $GITHUB_ENV | |
| - name: Install MPI | |
| shell: bash -eux {0} | |
| run: | | |
| FCFLAGS=-fPIC CFLAGS=-fPIC FFLAGS=-fPIC ${ATLAS_TOOLS}/install-mpi.sh --mpi openmpi --prefix ${DEPS_DIR}/openmpi | |
| [ -f ${DEPS_DIR}/openmpi/env.sh ] && source ${DEPS_DIR}/openmpi/env.sh | |
| [ -z ${MPI_HOME+x} ] || echo "MPI_HOME=${MPI_HOME}" >> $GITHUB_ENV | |
| - name: Install FFTW | |
| shell: bash -eux {0} | |
| run: | | |
| ${ATLAS_TOOLS}/install-fftw.sh --version 3.3.10 --prefix ${DEPS_DIR}/fftw | |
| echo "FFTW_ROOT=${DEPS_DIR}/fftw" >> $GITHUB_ENV | |
| - name: Install Qhull | |
| shell: bash -eux {0} | |
| run: | | |
| ${ATLAS_TOOLS}/install-qhull.sh --version 8.1-alpha3 --prefix ${DEPS_DIR}/qhull | |
| echo "Qhull_ROOT=${DEPS_DIR}/qhull" >> $GITHUB_ENV | |
| - name: Install LZ4 | |
| if: "!contains( matrix.compiler, 'nvhpc' )" | |
| run: | | |
| brew install lz4 | |
| echo "LZ4_ROOT=$(brew --prefix lz4)" >> $GITHUB_ENV | |
| - name: Install Eigen | |
| if: "!contains( matrix.compiler, 'nvhpc' )" | |
| run: | | |
| brew install eigen | |
| - name: Set Build & Test Environment | |
| run: | | |
| # Only add --oversubscribe arg for openmpi | |
| [ -z ${I_MPI_ROOT+x} ] && echo "ATLAS_RUN_MPI_ARGS=--oversubscribe" >> $GITHUB_ENV | |
| # Add mpirun to path for testing | |
| [ -z ${MPI_HOME+x} ] || echo "${MPI_HOME}/bin" >> $GITHUB_PATH | |
| if [[ "${{matrix.compiler}}" == intel-classic ]]; then | |
| echo "CFLAGS=-diag-disable=10441" >> $GITHUB_ENV | |
| echo "CXXFLAGS=-diag-disable=10441" >> $GITHUB_ENV | |
| echo "FCFLAGS=-diag-disable=10441" >> $GITHUB_ENV | |
| echo "FFLAGS=-diag-disable=10441" >> $GITHUB_ENV | |
| fi | |
| if [[ "${{matrix.compiler}}" == intel ]]; then | |
| echo "CFLAGS=-Rno-debug-disables-optimization" >> $GITHUB_ENV | |
| echo "CXXFLAGS=-Rno-debug-disables-optimization" >> $GITHUB_ENV | |
| fi | |
| - name: Build & Test | |
| id: build-test | |
| uses: ecmwf-actions/build-package@v2 | |
| with: | |
| self_coverage: ${{ matrix.coverage }} | |
| force_build: true | |
| cache_suffix: "${{ matrix.build_type }}-${{ env.CACHE_SUFFIX }}" | |
| recreate_cache: ${{ matrix.caching == false }} | |
| dependencies: | | |
| ecmwf/ecbuild | |
| ecmwf/eckit | |
| ecmwf/fckit | |
| dependency_branch: develop | |
| dependency_cmake_options: | | |
| ecmwf/eckit: "-G Ninja -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} -DENABLE_TESTS=OFF -DENABLE_ECKIT_CMD=OFF -DENABLE_ECKIT_SQL=OFF" | |
| ecmwf/fckit: "-G Ninja -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} -DENABLE_TESTS=OFF" | |
| cmake_options: "-G Ninja -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} -DATLAS_BITS_LOCAL=32 ${{ matrix.cmake_options }}" | |
| ctest_options: "${{ matrix.ctest_options }}" | |
| - name: Verify tools | |
| run: | | |
| export PATH=${{ steps.build-test.outputs.bin_path }}:$PATH | |
| echo "+ atlas --info" | |
| atlas --info | |
| echo "+ atlas-grids --list" | |
| atlas-grids --list | |
| - name: Codecov Upload | |
| if: steps.build-test.outputs.coverage_file | |
| uses: codecov/codecov-action@v2 | |
| with: | |
| files: ${{ steps.build-test.outputs.coverage_file }} |