Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add easyconfig Bio-SearchIO-hmmer-1.7.3-GCC-13.2.0.eb #21814

Open
wants to merge 3 commits into
base: develop
Choose a base branch
from

Conversation

julianmorillo
Copy link
Contributor

@julianmorillo julianmorillo commented Nov 8, 2024

It needs PR #21794 (for BioPerl dependency) to work.

@github-actions github-actions bot added the update label Nov 8, 2024
Copy link

github-actions bot commented Nov 8, 2024

Updated software Bio-SearchIO-hmmer-1.7.3-GCC-13.2.0.eb

Diff against Bio-SearchIO-hmmer-1.7.3-GCC-12.2.0.eb

easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-12.2.0.eb

diff --git a/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-12.2.0.eb b/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-13.2.0.eb
index d21b8fbf38..b26850e9d3 100644
--- a/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-12.2.0.eb
+++ b/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-13.2.0.eb
@@ -7,14 +7,14 @@ homepage = 'https://metacpan.org/pod/Bio::SearchIO::hmmer3'
 description = """Code to parse output from hmmsearch, hmmscan, phmmer and nhmmer, compatible
 with both version 2 and version 3 of the HMMER package from http://hmmer.org."""
 
-toolchain = {'name': 'GCC', 'version': '12.2.0'}
+toolchain = {'name': 'GCC', 'version': '13.2.0'}
 
 source_urls = ['https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/']
 sources = [SOURCE_TAR_GZ]
 checksums = ['686152f8ce7c611d27ee35ac002ecc309f6270e289a482993796a23bb5388246']
 
 dependencies = [
-    ('Perl', '5.36.0'),
+    ('Perl', '5.38.0'),
     ('BioPerl', '1.7.8'),
 ]
 
Diff against Bio-SearchIO-hmmer-1.7.3-GCC-11.3.0.eb

easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-11.3.0.eb

diff --git a/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-11.3.0.eb b/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-13.2.0.eb
index 840b2a8d6f..b26850e9d3 100644
--- a/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-11.3.0.eb
+++ b/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-13.2.0.eb
@@ -7,14 +7,14 @@ homepage = 'https://metacpan.org/pod/Bio::SearchIO::hmmer3'
 description = """Code to parse output from hmmsearch, hmmscan, phmmer and nhmmer, compatible
 with both version 2 and version 3 of the HMMER package from http://hmmer.org."""
 
-toolchain = {'name': 'GCC', 'version': '11.3.0'}
+toolchain = {'name': 'GCC', 'version': '13.2.0'}
 
 source_urls = ['https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/']
 sources = [SOURCE_TAR_GZ]
 checksums = ['686152f8ce7c611d27ee35ac002ecc309f6270e289a482993796a23bb5388246']
 
 dependencies = [
-    ('Perl', '5.34.1'),
+    ('Perl', '5.38.0'),
     ('BioPerl', '1.7.8'),
 ]
 
Diff against Bio-SearchIO-hmmer-1.7.3-GCC-11.2.0.eb

easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-11.2.0.eb

diff --git a/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-11.2.0.eb b/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-13.2.0.eb
old mode 100755
new mode 100644
index 89b75450d9..b26850e9d3
--- a/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-11.2.0.eb
+++ b/easybuild/easyconfigs/b/Bio-SearchIO-hmmer/Bio-SearchIO-hmmer-1.7.3-GCC-13.2.0.eb
@@ -7,14 +7,14 @@ homepage = 'https://metacpan.org/pod/Bio::SearchIO::hmmer3'
 description = """Code to parse output from hmmsearch, hmmscan, phmmer and nhmmer, compatible
 with both version 2 and version 3 of the HMMER package from http://hmmer.org."""
 
-toolchain = {'name': 'GCC', 'version': '11.2.0'}
+toolchain = {'name': 'GCC', 'version': '13.2.0'}
 
 source_urls = ['https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/']
 sources = [SOURCE_TAR_GZ]
 checksums = ['686152f8ce7c611d27ee35ac002ecc309f6270e289a482993796a23bb5388246']
 
 dependencies = [
-    ('Perl', '5.34.0'),
+    ('Perl', '5.38.0'),
     ('BioPerl', '1.7.8'),
 ]
 

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant