{data,numlib}[foss/2024a] Armadillo v14.0.3, arpack-ng v3.9.1, GDAL v3.9.2, ... #21608

maxim-masterov · 2024-10-09T16:34:56Z

(created using eb --new-pr)

Depends on:

HDF5-1.14.5 {data,math,tools}[GCCcore/13.3.0,foss/2024a,gompi/2024a] gperftools v2.16, HDF5 v1.14.5, HPX v1.10.0 #21570
Szip-2.1.1 {data,tools}[GCCcore/13.3.0,iimpi/2024a] HDF5 v1.14.5, Szip v2.1.1 #21510
Xerces-C++-3.2.5 {lib, data, numlib, tools, math}[GCCcore/13.3.0, foss/2024a, gfbf/2024a] libmad-0.15.1b, SoX-14.4.2, SuiteSparse-7.8.2, Szip-2.1.1, sympy-1.13.2, trimesh-4.4.9, Voro++-0.4.6, Xerces-C++-3.2.5, zsh-5.9 #21417
~~netCDF-4.9.2 {data}[gompi/2024a] netCDF-C++4 v4.3.1, netCDF-Fortran v4.6.1, netCDF v4.9.2, ... #21578~~
netCDF-4.9.2 {data}[gompi/2024a] netCDF-C++4 v4.3.1, netCDF-Fortran v4.6.1, netCDF v4.9.2, ... #21862
PCRE-8.45 Adding FLINT (+NTL), fmt, GEOS, LERC, libaio, libcerf, libcroco, libtirpc, libdap (+PCRE) for GCC(core) 13.3.0 #21282
GEOS-3.13.0 {math}[gfbf/2024a] Shapely v2.0.6 #21561
libtirpc-1.3.5 Adding FLINT (+NTL), fmt, GEOS, LERC, libaio, libcerf, libcroco, libtirpc, libdap (+PCRE) for GCC(core) 13.3.0 #21282
LERC-4.0.0 Adding FLINT (+NTL), fmt, GEOS, LERC, libaio, libcerf, libcroco, libtirpc, libdap (+PCRE) for GCC(core) 13.3.0 #21282
libgeotiff-1.7.3 {vis, data, tools, lib}[GCCcore/13.3.0] at-spi2-atk-2.38.0, at-spi2-core-2.54.0, exiv2-0.28.3, GraphicsMagick-1.3.45, HDF-4.3.0, IPython-8.27.0, inih-58, libgeotiff-1.7.3 #21433
HDF {vis, data, tools, lib}[GCCcore/13.3.0] at-spi2-atk-2.38.0, at-spi2-core-2.54.0, exiv2-0.28.3, GraphicsMagick-1.3.45, HDF-4.3.0, IPython-8.27.0, inih-58, libgeotiff-1.7.3 #21433

smoors · 2024-11-26T21:55:47Z

@maxim-masterov in the mean time v3.10.0 of GDAL has been released, see #21907
would you be ok if we dropped v3.9.2, or do you still need this version?

…asyconfigs into GDAL-2024a

github-actions · 2024-11-26T22:01:13Z

Updated software `Armadillo-14.0.3-foss-2024a.eb`

Diff against Armadillo-12.8.0-foss-2023b.eb

easybuild/easyconfigs/a/Armadillo/Armadillo-12.8.0-foss-2023b.eb

diff --git a/easybuild/easyconfigs/a/Armadillo/Armadillo-12.8.0-foss-2023b.eb b/easybuild/easyconfigs/a/Armadillo/Armadillo-14.0.3-foss-2024a.eb
index 2ca0b7de51..68036ea413 100644
--- a/easybuild/easyconfigs/a/Armadillo/Armadillo-12.8.0-foss-2023b.eb
+++ b/easybuild/easyconfigs/a/Armadillo/Armadillo-14.0.3-foss-2024a.eb
@@ -1,24 +1,24 @@
 name = 'Armadillo'
-version = '12.8.0'
+version = '14.0.3'
 
 homepage = 'https://arma.sourceforge.net/'
 description = """Armadillo is an open-source C++ linear algebra library (matrix maths) aiming towards
  a good balance between speed and ease of use. Integer, floating point and complex numbers are supported,
  as well as a subset of trigonometric and statistics functions."""
 
-toolchain = {'name': 'foss', 'version': '2023b'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 source_urls = ['https://sourceforge.net/projects/arma/files']
 sources = [SOURCELOWER_TAR_XZ]
-checksums = ['a89bb6fece5ce9fdd1d01a4bc145cf7cc0b939c5777cca46de69c2f5e3412cf0']
+checksums = ['ebd6215eeb01ee412fed078c8a9f7f87d4e1f6187ebcdc1bc09f46095a4f4003']
 
 builddependencies = [
-    ('CMake', '3.27.6'),
+    ('CMake', '3.29.3'),
 ]
 dependencies = [
-    ('Boost', '1.83.0'),
-    ('HDF5', '1.14.3'),
-    ('arpack-ng', '3.9.0'),
+    ('Boost', '1.85.0'),
+    ('HDF5', '1.14.5'),
+    ('arpack-ng', '3.9.1'),
 ]

Diff against Armadillo-12.6.2-foss-2023a.eb

easybuild/easyconfigs/a/Armadillo/Armadillo-12.6.2-foss-2023a.eb

diff --git a/easybuild/easyconfigs/a/Armadillo/Armadillo-12.6.2-foss-2023a.eb b/easybuild/easyconfigs/a/Armadillo/Armadillo-14.0.3-foss-2024a.eb
index 9b6d74fe58..68036ea413 100644
--- a/easybuild/easyconfigs/a/Armadillo/Armadillo-12.6.2-foss-2023a.eb
+++ b/easybuild/easyconfigs/a/Armadillo/Armadillo-14.0.3-foss-2024a.eb
@@ -1,25 +1,25 @@
 name = 'Armadillo'
-version = '12.6.2'
+version = '14.0.3'
 
 homepage = 'https://arma.sourceforge.net/'
 description = """Armadillo is an open-source C++ linear algebra library (matrix maths) aiming towards
  a good balance between speed and ease of use. Integer, floating point and complex numbers are supported,
  as well as a subset of trigonometric and statistics functions."""
 
-toolchain = {'name': 'foss', 'version': '2023a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 source_urls = ['https://sourceforge.net/projects/arma/files']
 sources = [SOURCELOWER_TAR_XZ]
-checksums = ['e7efaaf29abda3448447bdf8cba2cceaa19afb802981b62f0c6384c842b01609']
+checksums = ['ebd6215eeb01ee412fed078c8a9f7f87d4e1f6187ebcdc1bc09f46095a4f4003']
 
 builddependencies = [
-    ('CMake', '3.26.3'),
+    ('CMake', '3.29.3'),
 ]
-
 dependencies = [
-    ('Boost', '1.82.0'),
-    ('HDF5', '1.14.0'),
-    ('arpack-ng', '3.9.0'),
+    ('Boost', '1.85.0'),
+    ('HDF5', '1.14.5'),
+    ('arpack-ng', '3.9.1'),
 ]
 
+
 moduleclass = 'numlib'

Diff against Armadillo-11.4.3-foss-2022a.eb

easybuild/easyconfigs/a/Armadillo/Armadillo-11.4.3-foss-2022a.eb

diff --git a/easybuild/easyconfigs/a/Armadillo/Armadillo-11.4.3-foss-2022a.eb b/easybuild/easyconfigs/a/Armadillo/Armadillo-14.0.3-foss-2024a.eb
index c8c874dba0..68036ea413 100644
--- a/easybuild/easyconfigs/a/Armadillo/Armadillo-11.4.3-foss-2022a.eb
+++ b/easybuild/easyconfigs/a/Armadillo/Armadillo-14.0.3-foss-2024a.eb
@@ -1,25 +1,25 @@
 name = 'Armadillo'
-version = '11.4.3'
+version = '14.0.3'
 
 homepage = 'https://arma.sourceforge.net/'
 description = """Armadillo is an open-source C++ linear algebra library (matrix maths) aiming towards
  a good balance between speed and ease of use. Integer, floating point and complex numbers are supported,
  as well as a subset of trigonometric and statistics functions."""
 
-toolchain = {'name': 'foss', 'version': '2022a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 source_urls = ['https://sourceforge.net/projects/arma/files']
 sources = [SOURCELOWER_TAR_XZ]
-checksums = ['87603263664988af41da2ca4f36205e36ea47a9281fa6cfd463115f3797a1da2']
+checksums = ['ebd6215eeb01ee412fed078c8a9f7f87d4e1f6187ebcdc1bc09f46095a4f4003']
 
 builddependencies = [
-    ('CMake', '3.24.3'),
+    ('CMake', '3.29.3'),
 ]
-
 dependencies = [
-    ('Boost', '1.79.0'),
-    ('HDF5', '1.12.2'),
-    ('arpack-ng', '3.8.0'),
+    ('Boost', '1.85.0'),
+    ('HDF5', '1.14.5'),
+    ('arpack-ng', '3.9.1'),
 ]
 
+
 moduleclass = 'numlib'

Updated software `arpack-ng-3.9.1-foss-2024a.eb`

Diff against arpack-ng-3.9.1-foss-2023b.eb

easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.1-foss-2023b.eb

diff --git a/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.1-foss-2023b.eb b/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.1-foss-2024a.eb
index 4f029ffc4f..29d5a00219 100644
--- a/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.1-foss-2023b.eb
+++ b/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.1-foss-2024a.eb
@@ -1,31 +1,35 @@
+# Author:    Robert Mijakovic <[email protected]>
+
 easyblock = 'ConfigureMake'
 
 name = 'arpack-ng'
 version = '3.9.1'
 
 homepage = 'https://github.com/opencollab/arpack-ng'
-description = """ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems."""
+description = "ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems."
 
-toolchain = {'name': 'foss', 'version': '2023b'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 toolchainopts = {'pic': True, 'usempi': True}
 
-github_account = 'opencollab'
 source_urls = [GITHUB_SOURCE]
 sources = ['%(version)s.tar.gz']
 checksums = ['f6641deb07fa69165b7815de9008af3ea47eb39b2bb97521fbf74c97aba6e844']
 
 builddependencies = [
-    ('Autotools', '20220317'),
-    ('pkgconf', '2.0.3'),
-    ('Eigen', '3.4.0')
+    ('Autotools', '20231222'),
+    ('pkgconf', '2.2.0'),
+]
+dependencies = [
+    ('Eigen', '3.4.0'),
 ]
 
 preconfigopts = "sh bootstrap && "
 configopts = '--enable-mpi --with-pic --with-blas="$LIBBLAS" --with-lapack="$LIBLAPACK"'
 
+github_account = 'opencollab'
+
 sanity_check_paths = {
-    'files': ['lib64/libarpack.la', 'lib64/libarpack.%s' % SHLIB_EXT,
-              'lib64/libparpack.la', 'lib64/libparpack.%s' % SHLIB_EXT],
+    'files': ['lib64/libarpack.la', 'lib64/libarpack.so', 'lib64/libparpack.la', 'lib64/libparpack.so'],
     'dirs': [],
 }

Diff against arpack-ng-3.9.0-foss-2023b.eb

easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.0-foss-2023b.eb

diff --git a/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.0-foss-2023b.eb b/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.1-foss-2024a.eb
index 10d825ca22..29d5a00219 100644
--- a/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.0-foss-2023b.eb
+++ b/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.1-foss-2024a.eb
@@ -3,23 +3,21 @@
 easyblock = 'ConfigureMake'
 
 name = 'arpack-ng'
-version = '3.9.0'
+version = '3.9.1'
 
 homepage = 'https://github.com/opencollab/arpack-ng'
 description = "ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems."
 
-toolchain = {'name': 'foss', 'version': '2023b'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 toolchainopts = {'pic': True, 'usempi': True}
 
-github_account = 'opencollab'
-
 source_urls = [GITHUB_SOURCE]
 sources = ['%(version)s.tar.gz']
-checksums = ['24f2a2b259992d3c797d80f626878aa8e2ed5009d549dad57854bbcfb95e1ed0']
+checksums = ['f6641deb07fa69165b7815de9008af3ea47eb39b2bb97521fbf74c97aba6e844']
 
 builddependencies = [
-    ('Autotools', '20220317'),
-    ('pkgconf', '2.0.3'),
+    ('Autotools', '20231222'),
+    ('pkgconf', '2.2.0'),
 ]
 dependencies = [
     ('Eigen', '3.4.0'),
@@ -28,9 +26,10 @@ dependencies = [
 preconfigopts = "sh bootstrap && "
 configopts = '--enable-mpi --with-pic --with-blas="$LIBBLAS" --with-lapack="$LIBLAPACK"'
 
+github_account = 'opencollab'
+
 sanity_check_paths = {
-    'files': ['lib64/libarpack.la', 'lib64/libarpack.%s' % SHLIB_EXT,
-              'lib64/libparpack.la', 'lib64/libparpack.%s' % SHLIB_EXT],
+    'files': ['lib64/libarpack.la', 'lib64/libarpack.so', 'lib64/libparpack.la', 'lib64/libparpack.so'],
     'dirs': [],
 }

Diff against arpack-ng-3.9.0-foss-2023a.eb

easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.0-foss-2023a.eb

diff --git a/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.0-foss-2023a.eb b/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.1-foss-2024a.eb
index bdc9b5aa64..29d5a00219 100644
--- a/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.0-foss-2023a.eb
+++ b/easybuild/easyconfigs/a/arpack-ng/arpack-ng-3.9.1-foss-2024a.eb
@@ -1,34 +1,35 @@
-##
 # Author:    Robert Mijakovic <[email protected]>
-##
+
 easyblock = 'ConfigureMake'
 
 name = 'arpack-ng'
-version = '3.9.0'
+version = '3.9.1'
 
 homepage = 'https://github.com/opencollab/arpack-ng'
-description = """ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems."""
+description = "ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems."
 
-toolchain = {'name': 'foss', 'version': '2023a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 toolchainopts = {'pic': True, 'usempi': True}
 
-github_account = 'opencollab'
 source_urls = [GITHUB_SOURCE]
 sources = ['%(version)s.tar.gz']
-checksums = ['24f2a2b259992d3c797d80f626878aa8e2ed5009d549dad57854bbcfb95e1ed0']
+checksums = ['f6641deb07fa69165b7815de9008af3ea47eb39b2bb97521fbf74c97aba6e844']
 
 builddependencies = [
-    ('Autotools', '20220317'),
-    ('pkgconf', '1.9.5'),
-    ('Eigen', '3.4.0')
+    ('Autotools', '20231222'),
+    ('pkgconf', '2.2.0'),
+]
+dependencies = [
+    ('Eigen', '3.4.0'),
 ]
 
 preconfigopts = "sh bootstrap && "
 configopts = '--enable-mpi --with-pic --with-blas="$LIBBLAS" --with-lapack="$LIBLAPACK"'
 
+github_account = 'opencollab'
+
 sanity_check_paths = {
-    'files': ['lib64/libarpack.la', 'lib64/libarpack.%s' % SHLIB_EXT,
-              'lib64/libparpack.la', 'lib64/libparpack.%s' % SHLIB_EXT],
+    'files': ['lib64/libarpack.la', 'lib64/libarpack.so', 'lib64/libparpack.la', 'lib64/libparpack.so'],
     'dirs': [],
 }

Updated software `GDAL-3.9.2-foss-2024a.eb`

Diff against GDAL-3.9.0-foss-2023b.eb

easybuild/easyconfigs/g/GDAL/GDAL-3.9.0-foss-2023b.eb

diff --git a/easybuild/easyconfigs/g/GDAL/GDAL-3.9.0-foss-2023b.eb b/easybuild/easyconfigs/g/GDAL/GDAL-3.9.2-foss-2024a.eb
index 2129945751..85b6186916 100644
--- a/easybuild/easyconfigs/g/GDAL/GDAL-3.9.0-foss-2023b.eb
+++ b/easybuild/easyconfigs/g/GDAL/GDAL-3.9.2-foss-2024a.eb
@@ -1,7 +1,7 @@
 easyblock = 'CMakeMake'
 
 name = 'GDAL'
-version = '3.9.0'
+version = '3.9.2'
 
 homepage = 'https://www.gdal.org'
 description = """GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style
@@ -9,54 +9,54 @@ description = """GDAL is a translator library for raster geospatial data formats
  to the calling application for all supported formats. It also comes with a variety of useful commandline utilities for
  data translation and processing."""
 
-toolchain = {'name': 'foss', 'version': '2023b'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 toolchainopts = {'usempi': True}
 
-source_urls = ['https://download.osgeo.org/%(namelower)s/%(version)s/']
-sources = [SOURCELOWER_TAR_XZ]
+source_urls = ['https://github.com/OSGeo/gdal/releases/download/v%(version)s/']
+sources = [SOURCELOWER_TAR_GZ]
 patches = ['%(name)s-3.6.2_fix-python-CC-CXX.patch']
 checksums = [
-    {'gdal-3.9.0.tar.xz': '577f80e9d14ff7c90b6bfbc34201652b4546700c01543efb4f4c3050e0b3fda2'},
+    {'gdal-3.9.2.tar.gz': 'c9767e79ca7245f704bfbcb47d771b2dc317d743536b78d648c3e92b95fbc21e'},
     {'GDAL-3.6.2_fix-python-CC-CXX.patch': '859b874b0c8ff7626a76d51f008bf05b7f89a35b325bdd1d126d2364154acc63'},
 ]
 
 builddependencies = [
-    ('CMake', '3.27.6'),
-    ('pkgconf', '2.0.3'),
+    ('CMake', '3.29.3'),
+    ('pkgconf', '2.2.0'),
     ('Bison', '3.8.2'),
 ]
 dependencies = [
-    ('Python', '3.11.5'),
+    ('Python', '3.12.3'),
     ('netCDF', '4.9.2'),
-    ('expat', '2.5.0'),
-    ('GEOS', '3.12.1'),
-    ('SQLite', '3.43.1'),
-    ('libarchive', '3.7.2'),
-    ('libxml2', '2.11.5'),
-    ('libpng', '1.6.40'),
+    ('expat', '2.6.2'),
+    ('GEOS', '3.12.2'),
+    ('SQLite', '3.45.3'),
+    ('libarchive', '3.7.4'),
+    ('libxml2', '2.12.7'),
+    ('libpng', '1.6.43'),
     ('libjpeg-turbo', '3.0.1'),
     ('LibTIFF', '4.6.0'),
-    ('zlib', '1.2.13'),
-    ('cURL', '8.3.0'),
+    ('zlib', '1.3.1'),
+    ('cURL', '8.7.1'),
     ('PCRE', '8.45'),
-    ('PROJ', '9.3.1'),
+    ('PROJ', '9.4.1'),
     ('libgeotiff', '1.7.3'),
-    ('SciPy-bundle', '2023.11'),
-    ('HDF5', '1.14.3'),
-    ('HDF', '4.2.16-2'),
-    ('Armadillo', '12.8.0'),
-    ('CFITSIO', '4.3.1'),
-    ('zstd', '1.5.5'),
-    ('giflib', '5.2.1'),
+    ('SciPy-bundle', '2024.05'),
+    ('HDF5', '1.14.5'),
+    ('HDF', '4.3.0'),
+    ('Armadillo', '14.0.3'),
+    ('CFITSIO', '4.4.1'),
+    ('zstd', '1.5.6'),
+    ('giflib', '5.2.2'),
     ('json-c', '0.17'),
     ('Xerces-C++', '3.2.5'),
-    ('PCRE2', '10.42'),
-    ('OpenEXR', '3.2.0'),
+    ('PCRE2', '10.43'),
+    ('OpenEXR', '3.2.4'),
     ('Brunsli', '0.1'),
     ('Qhull', '2020.2'),
     ('LERC', '4.0.0'),
-    ('OpenJPEG', '2.5.0'),
-    ('SWIG', '4.1.1'),
+    ('OpenJPEG', '2.5.2'),
+    ('SWIG', '4.2.1'),
 ]
 
 # iterative build for both static and shared libraries
@@ -70,7 +70,7 @@ configopts = [
 
 
 sanity_check_paths = {
-    'files': ['lib/libgdal.a', 'lib/libgdal.%s' % SHLIB_EXT],
+    'files': ['lib/libgdal.a', 'lib/libgdal.so'],
     'dirs': ['bin', 'include', 'lib/python%(pyshortver)s/site-packages'],
 }

Diff against GDAL-3.7.1-foss-2023a.eb

easybuild/easyconfigs/g/GDAL/GDAL-3.7.1-foss-2023a.eb

diff --git a/easybuild/easyconfigs/g/GDAL/GDAL-3.7.1-foss-2023a.eb b/easybuild/easyconfigs/g/GDAL/GDAL-3.9.2-foss-2024a.eb
index 88e35cd4db..85b6186916 100644
--- a/easybuild/easyconfigs/g/GDAL/GDAL-3.7.1-foss-2023a.eb
+++ b/easybuild/easyconfigs/g/GDAL/GDAL-3.9.2-foss-2024a.eb
@@ -1,7 +1,7 @@
 easyblock = 'CMakeMake'
 
 name = 'GDAL'
-version = '3.7.1'
+version = '3.9.2'
 
 homepage = 'https://www.gdal.org'
 description = """GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style
@@ -9,55 +9,54 @@ description = """GDAL is a translator library for raster geospatial data formats
  to the calling application for all supported formats. It also comes with a variety of useful commandline utilities for
  data translation and processing."""
 
-toolchain = {'name': 'foss', 'version': '2023a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 toolchainopts = {'usempi': True}
 
-source_urls = ['https://download.osgeo.org/%(namelower)s/%(version)s/']
-sources = [SOURCELOWER_TAR_XZ]
+source_urls = ['https://github.com/OSGeo/gdal/releases/download/v%(version)s/']
+sources = [SOURCELOWER_TAR_GZ]
 patches = ['%(name)s-3.6.2_fix-python-CC-CXX.patch']
-
 checksums = [
-    {'gdal-3.7.1.tar.xz': '9297948f0a8ba9e6369cd50e87c7e2442eda95336b94d2b92ef1829d260b9a06'},
+    {'gdal-3.9.2.tar.gz': 'c9767e79ca7245f704bfbcb47d771b2dc317d743536b78d648c3e92b95fbc21e'},
     {'GDAL-3.6.2_fix-python-CC-CXX.patch': '859b874b0c8ff7626a76d51f008bf05b7f89a35b325bdd1d126d2364154acc63'},
 ]
 
 builddependencies = [
-    ('CMake', '3.26.3'),
-    ('pkgconf', '1.9.5'),
+    ('CMake', '3.29.3'),
+    ('pkgconf', '2.2.0'),
     ('Bison', '3.8.2'),
 ]
 dependencies = [
-    ('Python', '3.11.3'),
+    ('Python', '3.12.3'),
     ('netCDF', '4.9.2'),
-    ('expat', '2.5.0'),
-    ('GEOS', '3.12.0'),
-    ('SQLite', '3.42.0'),
-    ('libarchive', '3.6.2'),
-    ('libxml2', '2.11.4'),
-    ('libpng', '1.6.39'),
-    ('libjpeg-turbo', '2.1.5.1'),
-    ('LibTIFF', '4.5.0'),
-    ('zlib', '1.2.13'),
-    ('cURL', '8.0.1'),
+    ('expat', '2.6.2'),
+    ('GEOS', '3.12.2'),
+    ('SQLite', '3.45.3'),
+    ('libarchive', '3.7.4'),
+    ('libxml2', '2.12.7'),
+    ('libpng', '1.6.43'),
+    ('libjpeg-turbo', '3.0.1'),
+    ('LibTIFF', '4.6.0'),
+    ('zlib', '1.3.1'),
+    ('cURL', '8.7.1'),
     ('PCRE', '8.45'),
-    ('PROJ', '9.2.0'),
-    ('libgeotiff', '1.7.1'),
-    ('SciPy-bundle', '2023.07'),
-    ('HDF5', '1.14.0'),
-    ('HDF', '4.2.16-2'),
-    ('Armadillo', '12.6.2'),
-    ('CFITSIO', '4.3.0'),
-    ('zstd', '1.5.5'),
-    ('giflib', '5.2.1'),
-    ('json-c', '0.16'),
-    ('Xerces-C++', '3.2.4'),
-    ('PCRE2', '10.42'),
-    ('OpenEXR', '3.1.7'),
+    ('PROJ', '9.4.1'),
+    ('libgeotiff', '1.7.3'),
+    ('SciPy-bundle', '2024.05'),
+    ('HDF5', '1.14.5'),
+    ('HDF', '4.3.0'),
+    ('Armadillo', '14.0.3'),
+    ('CFITSIO', '4.4.1'),
+    ('zstd', '1.5.6'),
+    ('giflib', '5.2.2'),
+    ('json-c', '0.17'),
+    ('Xerces-C++', '3.2.5'),
+    ('PCRE2', '10.43'),
+    ('OpenEXR', '3.2.4'),
     ('Brunsli', '0.1'),
     ('Qhull', '2020.2'),
     ('LERC', '4.0.0'),
-    ('OpenJPEG', '2.5.0'),
-    ('SWIG', '4.1.1'),
+    ('OpenJPEG', '2.5.2'),
+    ('SWIG', '4.2.1'),
 ]
 
 # iterative build for both static and shared libraries
@@ -71,7 +70,7 @@ configopts = [
 
 
 sanity_check_paths = {
-    'files': ['lib/libgdal.a', 'lib/libgdal.%s' % SHLIB_EXT],
+    'files': ['lib/libgdal.a', 'lib/libgdal.so'],
     'dirs': ['bin', 'include', 'lib/python%(pyshortver)s/site-packages'],
 }

Diff against GDAL-3.6.2-foss-2022b.eb

easybuild/easyconfigs/g/GDAL/GDAL-3.6.2-foss-2022b.eb

diff --git a/easybuild/easyconfigs/g/GDAL/GDAL-3.6.2-foss-2022b.eb b/easybuild/easyconfigs/g/GDAL/GDAL-3.9.2-foss-2024a.eb
index 576d90e74d..85b6186916 100644
--- a/easybuild/easyconfigs/g/GDAL/GDAL-3.6.2-foss-2022b.eb
+++ b/easybuild/easyconfigs/g/GDAL/GDAL-3.9.2-foss-2024a.eb
@@ -1,7 +1,7 @@
 easyblock = 'CMakeMake'
 
 name = 'GDAL'
-version = '3.6.2'
+version = '3.9.2'
 
 homepage = 'https://www.gdal.org'
 description = """GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style
@@ -9,73 +9,73 @@ description = """GDAL is a translator library for raster geospatial data formats
  to the calling application for all supported formats. It also comes with a variety of useful commandline utilities for
  data translation and processing."""
 
-toolchain = {'name': 'foss', 'version': '2022b'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 toolchainopts = {'usempi': True}
 
-source_urls = ['https://download.osgeo.org/gdal/%(version)s/']
-sources = [SOURCELOWER_TAR_XZ]
-patches = ['GDAL-3.6.2_fix-python-CC-CXX.patch']
+source_urls = ['https://github.com/OSGeo/gdal/releases/download/v%(version)s/']
+sources = [SOURCELOWER_TAR_GZ]
+patches = ['%(name)s-3.6.2_fix-python-CC-CXX.patch']
 checksums = [
-    {'gdal-3.6.2.tar.xz': '35f40d2e08061b342513cdcddc2b997b3814ef8254514f0ef1e8bc7aa56cf681'},
+    {'gdal-3.9.2.tar.gz': 'c9767e79ca7245f704bfbcb47d771b2dc317d743536b78d648c3e92b95fbc21e'},
     {'GDAL-3.6.2_fix-python-CC-CXX.patch': '859b874b0c8ff7626a76d51f008bf05b7f89a35b325bdd1d126d2364154acc63'},
 ]
 
 builddependencies = [
-    ('CMake', '3.24.3'),
-    ('pkgconf', '1.9.3'),
+    ('CMake', '3.29.3'),
+    ('pkgconf', '2.2.0'),
     ('Bison', '3.8.2'),
 ]
-
 dependencies = [
-    ('Python', '3.10.8'),
-    ('netCDF', '4.9.0'),
-    ('expat', '2.4.9'),
-    ('GEOS', '3.11.1'),
-    ('SQLite', '3.39.4'),
-    ('libxml2', '2.10.3'),
-    ('libpng', '1.6.38'),
-    ('libjpeg-turbo', '2.1.4'),
-    ('LibTIFF', '4.4.0'),
-    ('zlib', '1.2.12'),
-    ('cURL', '7.86.0'),
+    ('Python', '3.12.3'),
+    ('netCDF', '4.9.2'),
+    ('expat', '2.6.2'),
+    ('GEOS', '3.12.2'),
+    ('SQLite', '3.45.3'),
+    ('libarchive', '3.7.4'),
+    ('libxml2', '2.12.7'),
+    ('libpng', '1.6.43'),
+    ('libjpeg-turbo', '3.0.1'),
+    ('LibTIFF', '4.6.0'),
+    ('zlib', '1.3.1'),
+    ('cURL', '8.7.1'),
     ('PCRE', '8.45'),
-    ('PROJ', '9.1.1'),
-    ('libgeotiff', '1.7.1'),
-    ('SciPy-bundle', '2023.02'),
-    ('HDF5', '1.14.0'),
-    ('HDF', '4.2.15'),
-    ('Armadillo', '11.4.3'),
-    ('CFITSIO', '4.2.0'),
-    ('zstd', '1.5.2'),
-    ('giflib', '5.2.1'),
-    ('json-c', '0.16'),
-    ('Xerces-C++', '3.2.4'),
-    ('PCRE2', '10.40'),
-    ('OpenEXR', '3.1.5'),
+    ('PROJ', '9.4.1'),
+    ('libgeotiff', '1.7.3'),
+    ('SciPy-bundle', '2024.05'),
+    ('HDF5', '1.14.5'),
+    ('HDF', '4.3.0'),
+    ('Armadillo', '14.0.3'),
+    ('CFITSIO', '4.4.1'),
+    ('zstd', '1.5.6'),
+    ('giflib', '5.2.2'),
+    ('json-c', '0.17'),
+    ('Xerces-C++', '3.2.5'),
+    ('PCRE2', '10.43'),
+    ('OpenEXR', '3.2.4'),
     ('Brunsli', '0.1'),
     ('Qhull', '2020.2'),
     ('LERC', '4.0.0'),
-    ('OpenJPEG', '2.5.0'),
+    ('OpenJPEG', '2.5.2'),
+    ('SWIG', '4.2.1'),
 ]
 
-# common configopts for static, shared library builds
-_base_configopts = ' '.join([
-    '-DGDAL_USE_INTERNAL_LIBS=OFF',
-    '-DGEOTIFF_INCLUDE_DIR=$EBROOTLIBGEOTIFF/include',
-    '-DPython_ROOT=$EBROOTPYTHON',
-    '-DGDAL_USE_MYSQL=OFF',
-])
-
 # iterative build for both static and shared libraries
-configopts = [' '.join([_base_configopts, x]) for x in ['-DBUILD_SHARED_LIBS=OFF', '']]
+local_configopts_common = "-DGDAL_USE_INTERNAL_LIBS=OFF -DGDAL_USE_MYSQL=OFF "
+local_configopts_common += "-DGEOTIFF_INCLUDE_DIR=$EBROOTLIBGEOTIFF/include -DPython_ROOT=$EBROOTPYTHON "
+
+configopts = [
+    local_configopts_common + "-DBUILD_SHARED_LIBS=OFF",
+    local_configopts_common
+]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
 
 sanity_check_paths = {
-    'files': ['lib/libgdal.a', 'lib/libgdal.%s' % SHLIB_EXT],
-    'dirs': ['bin', 'include', 'lib/python%(pyshortver)s/site-packages']
+    'files': ['lib/libgdal.a', 'lib/libgdal.so'],
+    'dirs': ['bin', 'include', 'lib/python%(pyshortver)s/site-packages'],
 }
 
-sanity_check_commands = ["python -c 'import osgeo.gdal'"]
+sanity_check_commands = ["python -c 'import osgeo.%(namelower)s'"]
+
+modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
 
 moduleclass = 'data'

verdurin · 2024-11-27T15:41:44Z

There's also the giflib version issue - could it use 5.2.1 instead?

maxim-masterov · 2024-12-02T21:17:47Z

@smoors I can switch to GDAL v3.10.0, no problem. Only Fiona from #21614 needs to be updated.

@verdurin What's the problem with giflib 5.2.2? I see that #21907 also uses v5.2.2.

Add GDAL and deps

42cc68c

maxim-masterov added the update label Oct 9, 2024

Remove HDF4

23468a0

maxim-masterov added the 2024a issues & PRs related to 2024a common toolchains label Oct 9, 2024

maxim-masterov mentioned this pull request Oct 10, 2024

{data}[foss/2024a] Fiona v1.10.1 #21614

Open

Update GEOS version in GDAL-3.9.2-foss-2024a.eb

8dd4e0c

branfosj mentioned this pull request Nov 26, 2024

{data}[foss/2024a] GDAL v3.10.0 #21907

Open

1 task

Merge branch 'develop' of https://github.com/easybuilders/easybuild-e…

989c858

…asyconfigs into GDAL-2024a

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{data,numlib}[foss/2024a] Armadillo v14.0.3, arpack-ng v3.9.1, GDAL v3.9.2, ... #21608

{data,numlib}[foss/2024a] Armadillo v14.0.3, arpack-ng v3.9.1, GDAL v3.9.2, ... #21608

maxim-masterov commented Oct 9, 2024 •

edited

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smoors commented Nov 26, 2024

github-actions bot commented Nov 26, 2024

verdurin commented Nov 27, 2024

maxim-masterov commented Dec 2, 2024

{data,numlib}[foss/2024a] Armadillo v14.0.3, arpack-ng v3.9.1, GDAL v3.9.2, ... #21608

Are you sure you want to change the base?

{data,numlib}[foss/2024a] Armadillo v14.0.3, arpack-ng v3.9.1, GDAL v3.9.2, ... #21608

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maxim-masterov commented Oct 9, 2024 • edited Loading

smoors commented Nov 26, 2024

github-actions bot commented Nov 26, 2024

Updated software Armadillo-14.0.3-foss-2024a.eb

Updated software arpack-ng-3.9.1-foss-2024a.eb

Updated software GDAL-3.9.2-foss-2024a.eb

verdurin commented Nov 27, 2024

maxim-masterov commented Dec 2, 2024

maxim-masterov commented Oct 9, 2024 •

edited

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Updated software `Armadillo-14.0.3-foss-2024a.eb`

Updated software `arpack-ng-3.9.1-foss-2024a.eb`

Updated software `GDAL-3.9.2-foss-2024a.eb`