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update the egyptian fruit bat dataset
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Radek Osmulski
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Jun 25, 2021
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{ | ||
"cells": [ | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"# Download Dataset" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"Let's begin by downloading and extracting the dataset.\n", | ||
"\n", | ||
"To download the full dataset, use this URL: https://archive.org/details/egyptian_fruit_bat\n", | ||
"To download the 10k flavor of the dataset, use this URL: https://archive.org/details/egyptian_fruit_bats_10k\n", | ||
"\n", | ||
"All other steps remain the same." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 1, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"--2021-01-26 11:29:23-- https://archive.org/download/egyptian_fruit_bats/egyptian_fruit_bats.zip\n", | ||
"Resolving archive.org (archive.org)... 207.241.224.2\n", | ||
"Connecting to archive.org (archive.org)|207.241.224.2|:443... connected.\n", | ||
"HTTP request sent, awaiting response... 302 Found\n", | ||
"Location: https://ia601500.us.archive.org/0/items/egyptian_fruit_bats/egyptian_fruit_bats.zip [following]\n", | ||
"--2021-01-26 11:29:27-- https://ia601500.us.archive.org/0/items/egyptian_fruit_bats/egyptian_fruit_bats.zip\n", | ||
"Resolving ia601500.us.archive.org (ia601500.us.archive.org)... 207.241.227.110\n", | ||
"Connecting to ia601500.us.archive.org (ia601500.us.archive.org)|207.241.227.110|:443... connected.\n", | ||
"HTTP request sent, awaiting response... 200 OK\n", | ||
"Length: 59031044836 (55G) [application/zip]\n", | ||
"Saving to: ‘egyptian_fruit_bats.zip’\n", | ||
"\n", | ||
"egyptian_fruit_bats 100%[===================>] 54.98G 4.20MB/s in 4h 28m \n", | ||
"\n", | ||
"2021-01-26 15:57:34 (3.50 MB/s) - ‘egyptian_fruit_bats.zip’ saved [59031044836/59031044836]\n", | ||
"\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"!mkdir data\n", | ||
"!cd data && wget https://archive.org/download/egyptian_fruit_bats/egyptian_fruit_bats.zip\n", | ||
"!cd data && unzip -q egyptian_fruit_bats.zip" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"And we are all set!" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 3, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"annotations.csv \u001b[0m\u001b[01;34maudio\u001b[0m/ \u001b[01;31megyptian_fruit_bats.zip\u001b[0m\r\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"ls data" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"`annotations.csv` contains the labels, while the audio files are stored under `data/audio`" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 5, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"91081\r\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"ls -lht data/audio | wc -l" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"A total of 91080 bat vocalizations, all recorded at 250_000 Hz." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 6, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"\u001b[0m\u001b[00;36m0.wav\u001b[0m\n", | ||
"\u001b[00;36m10000.wav\u001b[0m\n", | ||
"\u001b[00;36m10001.wav\u001b[0m\n", | ||
"\u001b[00;36m10002.wav\u001b[0m\n", | ||
"\u001b[00;36m10003.wav\u001b[0m\n", | ||
"\u001b[00;36m10004.wav\u001b[0m\n", | ||
"\u001b[00;36m10005.wav\u001b[0m\n", | ||
"\u001b[00;36m10006.wav\u001b[0m\n", | ||
"\u001b[00;36m10007.wav\u001b[0m\n", | ||
"\u001b[00;36m10008.wav\u001b[0m\n", | ||
"ls: write error\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"ls data/audio | head" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 7, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"import pandas as pd\n", | ||
"\n", | ||
"anno = pd.read_csv('data/annotations.csv')" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 9, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"data": { | ||
"text/html": [ | ||
"<div>\n", | ||
"<style scoped>\n", | ||
" .dataframe tbody tr th:only-of-type {\n", | ||
" vertical-align: middle;\n", | ||
" }\n", | ||
"\n", | ||
" .dataframe tbody tr th {\n", | ||
" vertical-align: top;\n", | ||
" }\n", | ||
"\n", | ||
" .dataframe thead th {\n", | ||
" text-align: right;\n", | ||
" }\n", | ||
"</style>\n", | ||
"<table border=\"1\" class=\"dataframe\">\n", | ||
" <thead>\n", | ||
" <tr style=\"text-align: right;\">\n", | ||
" <th></th>\n", | ||
" <th>Emitter</th>\n", | ||
" <th>Addressee</th>\n", | ||
" <th>Context</th>\n", | ||
" <th>Emitter pre-vocalization action</th>\n", | ||
" <th>Addressee pre-vocalization action</th>\n", | ||
" <th>Emitter post-vocalization action</th>\n", | ||
" <th>Addressee post-vocalization action</th>\n", | ||
" <th>File Name</th>\n", | ||
" </tr>\n", | ||
" </thead>\n", | ||
" <tbody>\n", | ||
" <tr>\n", | ||
" <th>0</th>\n", | ||
" <td>118</td>\n", | ||
" <td>0</td>\n", | ||
" <td>9</td>\n", | ||
" <td>2</td>\n", | ||
" <td>2</td>\n", | ||
" <td>3</td>\n", | ||
" <td>3</td>\n", | ||
" <td>0.wav</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>1</th>\n", | ||
" <td>0</td>\n", | ||
" <td>0</td>\n", | ||
" <td>11</td>\n", | ||
" <td>0</td>\n", | ||
" <td>0</td>\n", | ||
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" <td>0</td>\n", | ||
" <td>1.wav</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>2</th>\n", | ||
" <td>118</td>\n", | ||
" <td>0</td>\n", | ||
" <td>12</td>\n", | ||
" <td>2</td>\n", | ||
" <td>2</td>\n", | ||
" <td>3</td>\n", | ||
" <td>3</td>\n", | ||
" <td>2.wav</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>3</th>\n", | ||
" <td>0</td>\n", | ||
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" <td>3.wav</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>4</th>\n", | ||
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" <td>0</td>\n", | ||
" <td>0</td>\n", | ||
" <td>0</td>\n", | ||
" <td>4.wav</td>\n", | ||
" </tr>\n", | ||
" </tbody>\n", | ||
"</table>\n", | ||
"</div>" | ||
], | ||
"text/plain": [ | ||
" Emitter Addressee Context Emitter pre-vocalization action \\\n", | ||
"0 118 0 9 2 \n", | ||
"1 0 0 11 0 \n", | ||
"2 118 0 12 2 \n", | ||
"3 0 0 12 0 \n", | ||
"4 0 0 12 0 \n", | ||
"\n", | ||
" Addressee pre-vocalization action Emitter post-vocalization action \\\n", | ||
"0 2 3 \n", | ||
"1 0 0 \n", | ||
"2 2 3 \n", | ||
"3 0 0 \n", | ||
"4 0 0 \n", | ||
"\n", | ||
" Addressee post-vocalization action File Name \n", | ||
"0 3 0.wav \n", | ||
"1 0 1.wav \n", | ||
"2 3 2.wav \n", | ||
"3 0 3.wav \n", | ||
"4 0 4.wav " | ||
] | ||
}, | ||
"execution_count": 9, | ||
"metadata": {}, | ||
"output_type": "execute_result" | ||
} | ||
], | ||
"source": [ | ||
"anno.head()" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"Each of the audio files has been assigned six labels. The files are associated with labels via the file name." | ||
] | ||
} | ||
], | ||
"metadata": { | ||
"kernelspec": { | ||
"display_name": "Python 3", | ||
"language": "python", | ||
"name": "python3" | ||
}, | ||
"language_info": { | ||
"codemirror_mode": { | ||
"name": "ipython", | ||
"version": 3 | ||
}, | ||
"file_extension": ".py", | ||
"mimetype": "text/x-python", | ||
"name": "python", | ||
"nbconvert_exporter": "python", | ||
"pygments_lexer": "ipython3", | ||
"version": "3.7.6" | ||
} | ||
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"nbformat": 4, | ||
"nbformat_minor": 4 | ||
} |
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