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Merge pull request #104 from dwhswenson/github-actions
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| Original file line number | Diff line number | Diff line change |
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| INSTALL_AUTORELEASE="python -m pip install autorelease==0.2.6" | ||
| if [ -f autorelease-env.sh ]; then | ||
| source autorelease-env.sh | ||
| fi | ||
|
|
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,33 @@ | ||
| name: Autorelease | ||
| on: | ||
| release: | ||
| types: [published] | ||
|
|
||
| jobs: | ||
| deploy_pypi: | ||
| runs-on: ubuntu-latest | ||
| name: "Deploy to PyPI" | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: "3.x" | ||
| - run: | # TODO: move this to an action | ||
| source ./.github/workflows/autorelease-default-env.sh | ||
| if [ -f "autorelease-env.sh" ]; then | ||
| cat autorelease-env.sh >> $GITHUB_ENV | ||
| fi | ||
| eval $INSTALL_AUTORELEASE | ||
| name: "Install autorelease" | ||
| - run: | | ||
| python -m pip install twine wheel | ||
| name: "Install release tools" | ||
| - run: | | ||
| python setup.py sdist bdist_wheel | ||
| twine check dist/* | ||
| name: "Build and check package" | ||
| - uses: pypa/gh-action-pypi-publish@master | ||
| with: | ||
| password: ${{ secrets.pypi_password }} | ||
| name: "Deploy to pypi" | ||
|
|
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,29 @@ | ||
| name: Autorelease | ||
| on: | ||
| push: | ||
| branches: | ||
| - stable | ||
|
|
||
| jobs: | ||
| release-gh: | ||
| runs-on: ubuntu-latest | ||
| name: "Cut release" | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: "3.7" | ||
| - run: | # TODO: move this to an action | ||
| source ./.github/workflows/autorelease-default-env.sh | ||
| if [ -f "autorelease-env.sh" ]; then | ||
| cat autorelease-env.sh >> $GITHUB_ENV | ||
| fi | ||
| eval $INSTALL_AUTORELEASE | ||
| name: "Install autorelease" | ||
| - run: | | ||
| VERSION=`python setup.py --version` | ||
| PROJECT=`python setup.py --name` | ||
| echo $PROJECT $VERSION | ||
| autorelease-release --project $PROJECT --version $VERSION --token $AUTORELEASE_TOKEN | ||
| env: | ||
| AUTORELEASE_TOKEN: ${{ secrets.AUTORELEASE_TOKEN }} |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,60 @@ | ||
| name: "Autorelease" | ||
| on: | ||
| pull_request: | ||
| branches: | ||
| - stable | ||
|
|
||
| defaults: | ||
| run: | ||
| shell: bash | ||
|
|
||
| jobs: | ||
| deploy_testpypi: | ||
| runs-on: ubuntu-latest | ||
| name: "Deployment test" | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: "3.x" | ||
| - run: | # TODO: move this to an action | ||
| source ./.github/workflows/autorelease-default-env.sh | ||
| if [ -f "autorelease-env.sh" ]; then | ||
| cat autorelease-env.sh >> $GITHUB_ENV | ||
| fi | ||
| eval $INSTALL_AUTORELEASE | ||
| name: "Install autorelease" | ||
| - run: | | ||
| python -m pip install twine wheel | ||
| name: "Install release tools" | ||
| - run: | | ||
| bump-dev-version | ||
| python setup.py --version | ||
| name: "Bump testpypi dev version" | ||
| - run: | | ||
| python setup.py sdist bdist_wheel | ||
| twine check dist/* | ||
| name: "Build and check package" | ||
| - uses: pypa/gh-action-pypi-publish@master | ||
| with: | ||
| password: ${{ secrets.testpypi_password }} | ||
| repository_url: https://test.pypi.org/legacy/ | ||
| name: "Deploy to testpypi" | ||
| test_testpypi: | ||
| runs-on: ubuntu-latest | ||
| name: "Test deployed" | ||
| needs: deploy_testpypi | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: "3.x" | ||
| - run: | # TODO: move this to an action | ||
| source ./.github/workflows/autorelease-default-env.sh | ||
| if [ -f "autorelease-env.sh" ]; then | ||
| cat autorelease-env.sh >> $GITHUB_ENV | ||
| fi | ||
| eval $INSTALL_AUTORELEASE | ||
| name: "Install autorelease" | ||
| - run: test-testpypi | ||
|
|
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,65 @@ | ||
| name: "Unit tests" | ||
| on: | ||
| pull_request: | ||
| branches: | ||
| - master | ||
| - stable | ||
| push: | ||
| branches: | ||
| - master | ||
| tags: | ||
| - "v*" | ||
| schedule: | ||
| - cron: "20 5 * * *" | ||
|
|
||
| defaults: | ||
| run: | ||
| shell: bash -l {0} | ||
|
|
||
| jobs: | ||
| test_suite: | ||
| runs-on: ubuntu-latest | ||
| name: "Unit Tests" | ||
| strategy: | ||
| matrix: | ||
| CONDA_PY: | ||
| - 3.9 | ||
| - 3.8 | ||
| - 3.7 | ||
| - 3.6 | ||
| MDTRAJ: ["mdtraj-release"] | ||
| include: | ||
| - CONDA_PY: 3.9 | ||
| MDTRAJ: "mdtraj-dev" | ||
|
|
||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: actions/setup-python@v2 | ||
| - uses: conda-incubator/setup-miniconda@v2 | ||
| with: | ||
| auto-update-python: true | ||
| python-version: ${{ matrix.CONDA_PY }} | ||
| - name: "Install" | ||
| env: | ||
| MDTRAJ: ${{ matrix.MDTRAJ }} | ||
| run: | | ||
| source ci/pip-install/install_requirements.sh | ||
| pip install -e . | ||
| pip install -U -r ci/pip-install/testing_requirements.txt | ||
| if [ "$MDTRAJ" = "mdtraj-dev" ]; then | ||
| pip install --upgrade --force-reinstall -r ci/pip-install/mdtraj_dev.txt | ||
| pip install -r optional_installs.txt | ||
| fi | ||
| - name: "Versions" | ||
| run: pip list | ||
| - name: "Autorelease check" | ||
| run: python autorelease_check.py | ||
| - name: "Tests" | ||
| env: | ||
| PY_COLORS: "1" | ||
| run: | | ||
| python -c "import contact_map" | ||
| py.test -vv --cov=contact_map --cov-report xml | ||
| - name: "Report coverage" | ||
| if: ${{ github.event }} != "schedule" | ||
| run: bash <(curl -s https://codecov.io/bash) |
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