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Constraint-based metabolic modeling software from the Chandrasekaran Lab

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metabolicmodeling

This repository contains code that can be used to analyze constraint-based metabolic models.

Dependencies

Many functions in this repository require the cobratoolbox or cobrapy. Additionally, the Gurobi solver is required for many linear programming-based problems.

Contributing

Contributions are welcome! Please read the contributions guide to get started. Also feel free to submit bugs, feature requests, and pull requests.

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Constraint-based metabolic modeling software from the Chandrasekaran Lab

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  • MATLAB 59.1%
  • Python 40.9%