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doc:remove unidock_ad4 in README (#98)
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dp-yuanyn authored Mar 8, 2024
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### Using binary
Please download the latest binary of Uni-Dock at the assets tab of [the Release page](https://github.com/dptech-corp/Uni-Dock/releases).
Executable `unidock` supports vina and vinardo scoring functions, and `unidock_ad4` supports ad4 scoring function.
Executable `unidock` to dock.
After downloading, please make sure that the path to `unidock` is in your `PATH` environment variable.
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To launch a Uni-Dock job, the most important parameters are as follows:
- `--receptor`: filepath of the receptor (PDBQT)
(If you want to use `ad4` scoring function, you need to generate affinity maps first and use `--maps <mapdir/receptor_prefix>` instead of `--receptor`. The method to generate maps is in [here](https://autodock-vina.readthedocs.io/en/latest/docking_basic.html#optional-generating-affinity-maps-for-autodock-ff))
- `--gpu_batch`: filepath of the ligands to dock with GPU (PDBQT), enter multiple at a time, separated by spaces (" ")
- `--search_mode`: computational complexity, choose in \[*`fast`*, *`balance`*, and *`detail`*].
***Advanced options***
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