Popular repositories Loading

1. metheor metheor Public

   ☄️ Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments (Lee et al., PLOS Computational Biology. 2023)

   Rust 43 8

2. chromoformer chromoformer Public

   The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)

   Python 34 3

3. antiberty-pytorch antiberty-pytorch Public

   An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.

   Jupyter Notebook 22 5

4. snakemake-wrappers snakemake-wrappers Public

   🐍 Snakemake wrappers for bioinformatics.

   Python 18 2

5. spliceai-pytorch spliceai-pytorch Public

   Implementation of SpliceAI, Illumina's deep neural network to predict variant effects on splicing, in PyTorch.

   Jupyter Notebook 12 3

6. bioinformatics-one-liners bioinformatics-one-liners Public

   📝 Useful bioinformatics one-line commands.

   9 1