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chore(pt): update multitask example #4419

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merged 1 commit into from
Nov 26, 2024

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@iProzd iProzd commented Nov 25, 2024

Summary by CodeRabbit

  • New Features

    • Updated multi-task model configuration with a new descriptor for enhanced representation learning.
    • Introduced additional parameters for model initialization and attention mechanisms.
  • Bug Fixes

    • Replaced outdated descriptor references in model configurations to ensure compatibility with new settings.

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coderabbitai bot commented Nov 25, 2024

📝 Walkthrough

Walkthrough

The changes in this pull request involve updates to the JSON configuration for a multi-task model, specifically modifying the descriptors used in the model's definition. The sea_descriptor_1 has been replaced with dpa2_descriptor in the model_dict for both water_1 and water_2. The new descriptor introduces a more complex structure in the shared_dict, adding parameters related to model initialization and representation learning, including sections for repinit and repformer.

Changes

File Path Change Summary
examples/water_multi_task/pytorch_example/input_torch.json - Updated model_dict.water_1 and model_dict.water_2 to use dpa2_descriptor instead of sea_descriptor_1.
- Added dpa2_descriptor in shared_dict with new parameters for repinit and repformer.

Sequence Diagram(s)

sequenceDiagram
    participant User
    participant Model
    participant Descriptor
    participant SharedDict

    User->>Model: Request model initialization
    Model->>SharedDict: Retrieve dpa2_descriptor
    SharedDict->>Descriptor: Provide dpa2_descriptor parameters
    Descriptor-->>Model: Return descriptor details
    Model-->>User: Initialize model with dpa2_descriptor
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📥 Commits

Reviewing files that changed from the base of the PR and between ad30709 and f0b5cd3.


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Actionable comments posted: 0

🧹 Outside diff range and nitpick comments (1)
examples/water_multi_task/pytorch_example/input_torch.json (1)

78-78: Consider descriptor parameter specialization for different tasks.

Both water_1 and water_2 now share identical descriptor configurations. While this might be intentional for parameter sharing in multi-task learning, consider whether task-specific descriptor parameters might be beneficial for each water model's unique characteristics.

You might want to experiment with task-specific parameters in the descriptor configuration if the two water models have different physical characteristics or accuracy requirements.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Reviewing files that changed from the base of the PR and between ad30709 and f0b5cd3.

📒 Files selected for processing (1)
  • examples/water_multi_task/pytorch_example/input_torch.json (2 hunks)
🔇 Additional comments (3)
examples/water_multi_task/pytorch_example/input_torch.json (3)

9-57: Verify the descriptor parameters for optimal performance.

The dpa2_descriptor configuration appears well-structured with consistent cutoff parameters and dimensions. However, a few parameters might need verification:

  1. The tebd_dim (8) seems relatively small compared to nsel (120). This might limit the model's representational capacity.
  2. The attention configuration uses different hidden dimensions for different levels (attn1_hidden: 128, attn2_hidden: 32). Ensure this intentional asymmetry aligns with your model design.
✅ Verification successful

The dpa2_descriptor configuration parameters are consistent with established examples

After examining multiple dpa2 configurations in the codebase, I can confirm that:

  1. The tebd_dim value of 8 is the standard setting used across all examples, including small, medium, and large configurations.
  2. The nsel values (120 for repinit, 48 for repformer) match the configurations used in other water simulations.
  3. The attention dimensions (attn1_hidden: 128, attn2_hidden: 32) are consistent with all other dpa2 examples in the water directory.

The asymmetric attention configuration is a deliberate design choice present in all production examples, not a concern.

🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Search for similar dpa2 configurations in the codebase for parameter validation
rg -g '*.json' -A 10 '"dpa2_descriptor":\s*{' | grep -E '("tebd_dim"|"nsel"|"attn.*hidden")'

Length of output: 202


Script:

#!/bin/bash
# Search for similar dpa2 configurations in the codebase with fixed regex
rg -g '*.json' '"dpa2_descriptor"'

# If found, let's look for specific parameter patterns
rg -g '*.json' -A 2 '"tebd_dim"'
rg -g '*.json' -A 2 '"nsel"'
rg -g '*.json' -A 2 '"attn.*hidden"'

# Also search for any documentation or examples
fd -e md -e rst | xargs rg -l "dpa2"

Length of output: 6910


Line range hint 9-78: Verify training hyperparameters with new descriptor.

The switch to dpa2_descriptor introduces more complex representation learning. The current learning rate configuration (exp decay from 0.0002 to 3.51e-08) and training steps (100000) might need adjustment for optimal convergence with the new descriptor.


64-64: Verify fitting network compatibility with new descriptor.

The switch to dpa2_descriptor might require adjustments to the fitting network dimensions. The current neuron configuration [240, 240, 240] should be validated against the descriptor's output dimension (repinit.neuron[100] + potential repformer contributions).

Consider validating the input dimension compatibility between the descriptor output and the fitting network input:

✅ Verification successful

Network dimensions are compatible with dpa2_descriptor

The dpa2_descriptor configuration shows that the output dimension would be 100 (final layer of repinit.neuron) plus potential contributions from the repformer (g1_dim: 128, g2_dim: 32). The fitting network's input layer of 240 neurons is sufficient to handle this descriptor's output dimension.

🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Search for similar configurations to verify dimension compatibility
rg -g '*.json' -B 10 -A 10 '"fitting_net":\s*{.*"neuron":\s*\[240' | grep -B 5 -A 5 '"descriptor":\s*"dpa2_descriptor"'

Length of output: 259


Script:

#!/bin/bash
# Search for dpa2_descriptor configurations to understand typical network dimensions
rg -g '*.json' -B 10 -A 10 '"descriptor":\s*"dpa2_descriptor"'

Length of output: 2928


Script:

#!/bin/bash
# Search for fitting network configurations with 240 neurons
rg -g '*.json' -B 10 -A 10 '"fitting_net".*"neuron".*240'

Length of output: 59


Script:

#!/bin/bash
# Find any documentation or examples related to dpa2_descriptor
fd -g '*dpa2*.md' -g '*dpa2*.rst' -g '*dpa2*.txt'

Length of output: 206


Script:

#!/bin/bash
# Search for descriptor configuration in the same file
rg -g 'input_torch.json' -A 20 '"dpa2_descriptor":\s*{' examples/water_multi_task/pytorch_example/

Length of output: 206


Script:

#!/bin/bash
# Look for any files containing dpa2_descriptor configuration
fd . -t f -x grep -l "dpa2_descriptor" {}

Length of output: 104


Script:

#!/bin/bash
# Get the full content of input_torch.json to understand the descriptor configuration
cat examples/water_multi_task/pytorch_example/input_torch.json

Length of output: 3896

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codecov bot commented Nov 25, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 84.64%. Comparing base (ad30709) to head (f0b5cd3).
Report is 1 commits behind head on devel.

Additional details and impacted files
@@            Coverage Diff             @@
##            devel    #4419      +/-   ##
==========================================
- Coverage   84.64%   84.64%   -0.01%     
==========================================
  Files         614      614              
  Lines       57135    57135              
  Branches     3486     3487       +1     
==========================================
- Hits        48364    48363       -1     
  Misses       7645     7645              
- Partials     1126     1127       +1     

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

@wanghan-iapcm wanghan-iapcm added this pull request to the merge queue Nov 26, 2024
Merged via the queue into deepmodeling:devel with commit e7ad8dc Nov 26, 2024
60 checks passed
@njzjz njzjz added this to the v3.0.1 milestone Dec 6, 2024
@coderabbitai coderabbitai bot mentioned this pull request Dec 19, 2024
9 tasks
njzjz pushed a commit to njzjz/deepmd-kit that referenced this pull request Dec 22, 2024
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

- **New Features**
- Updated multi-task model configuration with a new descriptor for
enhanced representation learning.
- Introduced additional parameters for model initialization and
attention mechanisms.

- **Bug Fixes**
- Replaced outdated descriptor references in model configurations to
ensure compatibility with new settings.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->

(cherry picked from commit e7ad8dc)
njzjz pushed a commit that referenced this pull request Dec 23, 2024
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

- **New Features**
- Updated multi-task model configuration with a new descriptor for
enhanced representation learning.
- Introduced additional parameters for model initialization and
attention mechanisms.

- **Bug Fixes**
- Replaced outdated descriptor references in model configurations to
ensure compatibility with new settings.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->

(cherry picked from commit e7ad8dc)
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3 participants