Update torchFunctions to correct number of species for inference(#383) #397
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| name: Build and Validation with CPU inference | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| branches: | |
| - master | |
| jobs: | |
| build_validation: | |
| runs-on: self-hosted | |
| if: github.repository_owner == 'deepmodeling' | |
| container: | |
| image: ubuntu:20.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: install dependencies | |
| env: | |
| DEBIAN_FRONTEND: noninteractive | |
| run: | | |
| apt-get update | |
| apt-get install -y sudo wget unzip git software-properties-common make cmake g++ mpich openmpi-bin libopenmpi-dev libscalapack-mpi-dev vim git-core | |
| sudo sh -c "wget -O - https://dl.openfoam.org/gpg.key | apt-key add -" | |
| sudo add-apt-repository http://dl.openfoam.org/ubuntu | |
| sudo apt-get update | |
| export DEBIAN_FRONTEND=noninteractive | |
| apt-get -y install openfoam7 | |
| wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh | |
| bash Miniconda3-latest-Linux-x86_64.sh -b | |
| . ~/miniconda3/etc/profile.d/conda.sh | |
| conda create -n libcantera python=3.8 | |
| conda activate libcantera | |
| conda install -c cantera libcantera-devel | |
| conda install pytorch pybind11 | |
| conda install --channel https://conda.anaconda.org/zhaofeng-shu33 easydict | |
| git clone https://github.com/deepmodeling/deepflame-dev.git | |
| cd deepflame-dev | |
| - name: build and validation with CPU inference | |
| env: | |
| OMPI_ALLOW_RUN_AS_ROOT: 1 | |
| OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1 | |
| OMPI_MCA_btl_vader_single_copy_mechanism: none | |
| run: | |
| /bin/bash -c " echo $PWD && ls $PWD | |
| && wget https://github.com/JX278/DeepFlame-flareFGM-table/raw/main/flareFGM_Table_Download.zip | |
| && unzip flareFGM_Table_Download.zip | |
| && ls $PWD | |
| && ls flareFGM_Table_Download | |
| && cp -r flareFGM_Table_Download/SandiaD/flare.tbl examples/dfLowMachFoam/2DSandiaD_flareFGM/ | |
| && git clone https://github.com/intelligent-algorithm-team/intelligent-combustion.git | |
| && cp -r intelligent-combustion/DeePCK/Model/HE04_Hydrogen_ESH2_GMS_sub_20221101/ mechanisms/ && source ~/miniconda3/etc/profile.d/conda.sh && conda activate libcantera && source /opt/openfoam7/etc/bashrc | |
| && . configure.sh --use_pytorch && source ./bashrc && . install.sh | |
| && cd test && ./Allrun && conda deactivate " | |
| - name: test | |
| run: | | |
| cd test | |
| cmake -B build | |
| cmake --build build | |
| cd build | |
| ctest | |