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Tutorial and Usages of Behavioural Data extracted with DeepLabCut

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README

Analysis Walk Through

This repository introduces the usage of DeepLabCut (Mathis et al. 2018) and the post-processing and usage of the output using the BehaviouR package.

Mathis, Alexander, Pranav Mamidanna, Kevin M. Cury, Taiga Abe, Venkatesh N. Murthy, Mackenzie Weygandt Mathis, and Matthias Bethge. 2018. “DeepLabCut: Markerless Pose Estimation of User-Defined Body Parts with Deep Learning.” Nature Neuroscience 21 (9): 1281–9. https://doi.org/10.1038/s41593-018-0209-y.

Link to the presentation slides

Google Slides

To the Google Colab Notebook, please find it here

The BehaviouR package is written by Daniel Parthier in R

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