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fix vignettes
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- fix library call to MetMashR
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grlloyd committed Jan 19, 2024
1 parent 1d5e583 commit 54f5c69
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Showing 5 changed files with 10 additions and 20 deletions.
4 changes: 2 additions & 2 deletions vignettes/Extending_MetMashR.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -51,7 +51,7 @@ Once installed you can activate the packages in the usual way:
suppressPackageStartupMessages({
# load the packages
library(struct)
library(MetMasheR)
library(MetMashR)
library(metabolomicsWorkbenchR)
library(ggplot2)
})
Expand All @@ -60,7 +60,7 @@ suppressPackageStartupMessages({
```{r, eval=FALSE, include=TRUE}
# load the packages
library(struct)
library(MetMasheR)
library(MetMashR)
library(metabolomicsWorkbenchR)
library(ggplot2)
```
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4 changes: 2 additions & 2 deletions vignettes/annotate_mixtures.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -62,7 +62,7 @@ Once installed you can activate the packages in the usual way:
```{r, eval=TRUE, include=FALSE}
suppressPackageStartupMessages({
# load the packages
library(MetMasheR)
library(MetMashR)
library(ggplot2)
library(structToolbox)
library(dplyr)
Expand All @@ -72,7 +72,7 @@ suppressPackageStartupMessages({

```{r, eval=FALSE, include=TRUE}
# load the packages
library(MetMasheR)
library(MetMashR)
library(ggplot2)
library(dplyr)
```
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4 changes: 2 additions & 2 deletions vignettes/daphnia_example.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -40,7 +40,7 @@ Once installed you can activate the packages in the usual way:
suppressWarnings({suppressPackageStartupMessages({
# load the packages
library(struct)
library(MetMasheR)
library(MetMashR)
library(metabolomicsWorkbenchR)
library(ggplot2)
library(patchwork)
Expand All @@ -50,7 +50,7 @@ suppressWarnings({suppressPackageStartupMessages({
```{r, eval=FALSE, include=TRUE}
# load the packages
library(struct)
library(MetMasheR)
library(MetMashR)
library(metabolomicsWorkbenchR)
library(ggplot2)
library(patchwork)
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4 changes: 2 additions & 2 deletions vignettes/exploring_mtox.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -64,7 +64,7 @@ Once installed you can activate the packages in the usual way:
```{r, eval=TRUE, include=FALSE}
suppressWarnings(suppressPackageStartupMessages({
# load the packages
library(MetMasheR)
library(MetMashR)
library(ggplot2)
library(structToolbox)
library(dplyr)
Expand All @@ -74,7 +74,7 @@ suppressWarnings(suppressPackageStartupMessages({

```{r, eval=FALSE, include=TRUE}
# load the packages
library(MetMasheR)
library(MetMashR)
library(ggplot2)
library(structToolbox)
library(dplyr)
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14 changes: 2 additions & 12 deletions vignettes/using_MetMashR.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -93,28 +93,18 @@ Once installed you can activate the packages in the usual way:
```{r, eval=TRUE, include=FALSE}
suppressPackageStartupMessages({
# load the packages
library(MetMasheR)
library(MetMashR)
library(ggplot2)
library(structToolbox)
library(dplyr)
library(DT)
})
```

```{r, eval=TRUE, include=FALSE}
suppressPackageStartupMessages({
# load the packages
library(struct)
library(MetMasheR)
library(metabolomicsWorkbenchR)
library(ggplot2)
})
```

```{r, eval=FALSE, include=TRUE}
# load the packages
library(struct)
library(MetMasheR)
library(MetMashR)
library(metabolomicsWorkbenchR)
library(ggplot2)
```
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