--- re-building ‘annotate_mixtures.Rmd’ using rmarkdown

processing vignette 'annotate_mixtures.Rmd' failed with diagnostics:

processing vignette 'exploring_mtox.Rmd' failed with diagnostics:

processing vignette 'Extending_MetMashR.Rmd' failed with diagnostics:

processing vignette 'using_MetMashR.Rmd' failed with diagnostics:

Vignette re-building failed.

Failed to install 'MetMashR' from local:

Process completed with exit code 1.

processing vignette 'Extending_MetMashR.Rmd' failed with diagnostics:

Vignette re-building failed.

Failed to install 'MetMashR' from local:

Process completed with exit code 1.

Process completed with exit code 1.

The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

No files were found with the provided path: check. No artifacts will be uploaded.

replacing previous import ‘cowplot::align_plots’ by ‘patchwork::align_plots’ when loading ‘MetMashR’

replacing previous import ‘cowplot::align_plots’ by ‘patchwork::align_plots’ when loading ‘MetMashR’

replacing previous import ‘cowplot::align_plots’ by ‘patchwork::align_plots’ when loading ‘MetMashR’

harfbuzz 9.0.0 is already installed and up-to-date. To reinstall 9.0.0, run: brew reinstall harfbuzz

macOS's Gatekeeper has been disabled for this Cask

The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

No files were found with the provided path: check. No artifacts will be uploaded.

replacing previous import 'cowplot::align_plots' by 'patchwork::align_plots' when loading 'MetMashR'

replacing previous import 'cowplot::align_plots' by 'patchwork::align_plots' when loading 'MetMashR'

replacing previous import 'cowplot::align_plots' by 'patchwork::align_plots' when loading 'MetMashR'

The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/