We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
config
Cryo-EM images have very interesting noise models.
The community needs to be able to experiment with different types of noise, beyond the white Gaussian noise model currently implemented.
Noise
noise_utils.py
noise.py
space
image
fourier
forward
_forward_white_gaussian
_forward_[new_noise_model]
self.config
Details on the cryo-EM image formation models can be found in Donnat et al 2022.
The text was updated successfully, but these errors were encountered:
No branches or pull requests
What?
config
input to the docstrings of the simSPI/linear_simulator/noise_utils.py module.Why?
Cryo-EM images have very interesting noise models.
The community needs to be able to experiment with different types of noise, beyond the white Gaussian noise model currently implemented.
Where?
Noise
class is located in the simSPI/linear_simulator/noise_utils.py module.How?
noise_utils.py
module intonoise.py
and make sure the unit-tests and notebooks run.config
input to theNoise
class to have aspace
key, where the value will be eitherimage
orfourier
.forward
method into a private_forward_white_gaussian
method._forward_[new_noise_model]
method, with the projection operation in fourier space.forward
method that calls either_forward_white_gaussian
or_forward_[new_noise_model]
depending on the value in theself.config
attribute.Details on the cryo-EM image formation models can be found in Donnat et al 2022.
The text was updated successfully, but these errors were encountered: