Merge pull request #75 from compSPI/nina-pdf

Edit environment.yml + Add unit-tests for particle_metadata.ipynb
compSPI · Jun 14, 2022 · da789df · da789df
2 parents 0ee2cb5 + 9513d5e
commit da789df
Show file tree

Hide file tree

Showing 4 changed files with 406 additions and 276 deletions.
diff --git a/.gitignore b/.gitignore
@@ -1,3 +1,6 @@
+# Files output by the notebooks
+notebooks/data/metadata.star
+
 # Files output by the tests
 2dhb.*
 

diff --git a/environment.yml b/environment.yml
@@ -9,16 +9,16 @@ dependencies:
   - mrcfile
   - numba
   - numpy
-  - h5py>=2.10.0
+  - h5py>=3.6.0
   - pandas
   - pillow>=8.2.0
   - pip
   - pytest
   - pytest-cov
   - pytorch
   - pyyaml
-  - osfclient
   - pip :
+      - osfclient
       - jupyter
       - starfile