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🐛 pristine modules organization folder #36

Merged
merged 4 commits into from
Mar 15, 2024
Merged

🐛 pristine modules organization folder #36

merged 4 commits into from
Mar 15, 2024

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bunop
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@bunop bunop commented Mar 15, 2024

PR checklist

Closes #35

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Emit the versions.yml file.
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • PROFILE=docker pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware
    • PROFILE=singularity pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware
    • PROFILE=conda pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware

@bunop bunop added the bug Something isn't working label Mar 15, 2024
@bunop bunop merged commit 2e76a13 into master Mar 15, 2024
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[BUG] modules coming from nf-core must be placed in cnr-ibba organization
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