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1. DeepGS DeepGS Public

   DeepGS is a R package for predicting phenotypes from genotypes using deep learning techniques.

   R 49 19

2. CAFU CAFU Public

   CAFU: A Galaxy framework for exploring unmapped RNA-Seq data

   Python 11 6

3. deepTS deepTS Public

   deepTS explores transcriptional switch events from pairwise, temporal and population transcriptome data.

   R 6 4

4. iwa-miRNA iwa-miRNA Public

   iwa-miRNA is a web-based platform for interactive annotation of plant miRNAs

   Perl 1 1

5. deepEA deepEA Public

   deepEA: a containerized web server for interactive analysis of epitranscriptome sequencing data

   HTML 6 1

6. easyMF easyMF Public

   Matrix factorization-based biological discovery from large-scale transcriptome data using easyMF

   R 3 2