[WIP] Unify conversion_utils
#411
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: | |
- "main" | |
pull_request: | |
branches: | |
- "main" | |
schedule: | |
- cron: "0 0 * * *" | |
workflow_dispatch: | |
concurrency: | |
group: "${{ github.workflow }}-${{ github.ref }}" | |
cancel-in-progress: true | |
defaults: | |
run: | |
shell: bash -l {0} | |
jobs: | |
test: | |
name: Test on ${{ matrix.os }}, Python ${{ matrix.python-version }} | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [macOS-latest, ubuntu-latest] | |
python-version: ["3.10", "3.11"] | |
steps: | |
- name: Checkout Repository | |
uses: actions/checkout@v3 | |
- name: Additional info about the build | |
run: | | |
uname -a | |
df -h | |
ulimit -a | |
# More info on options: https://github.com/conda-incubator/setup-miniconda | |
- name: Setup Micromamba | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: devtools/conda-envs/test_env.yaml | |
environment-name: test | |
create-args: >- | |
python==${{ matrix.python-version }} | |
- name: Install package | |
run: | | |
python -m pip install . --no-deps | |
micromamba list | |
- name: Run tests | |
run: | | |
pytest -v --cov=mtenn --cov-report=xml --color=yes mtenn/tests/ | |
- name: Upload Code Coverage to Codecov | |
uses: codecov/codecov-action@v3 | |
# Don't upload coverage scheduled or on fork | |
if: ${{ github.repository == 'choderalab/mtenn' | |
&& github.event != 'schedule' }} | |
with: | |
file: ./coverage.xml | |
flags: unittests | |
name: codecov-${{ matrix.os }}-py${{ matrix.python-version }} | |
fail_ci_if_error: false |