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Workflow

• check for errors

cat r*e*

• clean

mv r* Trash
mv *.sh Scripts

• check simulations status

printf "\n"; pwd; printf "\n"; for (( c=0; c<=9; c++ )); do printf "$c "; ls -lah out-*-run0$c-rnd0* | awk '{print $5"\t"$9}' | tail -n 1; printf "  "; ls -lah err-*-run0$c-rnd0* | awk '{print $5"\t"$9}' | tail -n 1; printf "  "; cat $(ls err-*-run0$c-rnd0* | tail -n 1) | grep "Time = " | tail -n 1; done

(soon in go!:P)

• prepare to restart

for ((c=0; c<=9; c++)); do ../sltools continue -c conf*.json -o $(ls out-*-run0$c-rnd*.txt | tail -n 1); done

• start again

for (( c=0; c<=9; c++ )); do qsub $(ls PBS*-run0$c-rnd*.sh | tail -n 1); done

• in case you need start scripts

for (( c=0; c<=9; c++ )); do ../css $(ls ics-*-run0$c-rnd*.txt | tail -n 1) eurora <nn>-0$c-00 500 0; done

ICs

../sltools -v createICs -c config<nn>.json

If it does not work

bash create_IC-cineca-comb<nn>-run<nn>-NCM<nnnnn>-fPB<nnn>-W<n>-Z<nnn>.sh
../sltools -v createStartScripts -c config<nn>.json -i ics-cineca-comb<nn>-run<nn>-NCM<nnnnn>-fPB<nnn>-W<n>-Z<nnn>.txt

Dev branch only

Save part of a bad simulation

restartFromHere <STDOUT> <number of snapshot> 
cutStderr <STDERR> <number of snapshot>

Run in safe mode

kiraWrap <icsFileName> <integration time> <random seed if present>

Generic easy restart

If you need to restart any STDOUT file:

out2ics out-cineca-comb00-TF2-NCM5000-fPB010-W5-Z010-run36-rnd02.txt

Easy start script creation

../css ics-cineca-comb29-NCM10000-fPB010-W5-Z100-run03-rnd00.txt eurora 33-03-00 500 0
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