Added task and workflow for running TRGT to genotype tandem repeats in each sample. Included URL to the catalog used on the Phase1 Long Reads data. The WDL currently uses a container stored in AWS's container registry.

Added the lr-trgt folder with Dockerfile and Makefile which specifies how the lr-trgt docker image was created that is referenced in the TRGT.wdl task/workflow. The Makefile is currently configured to push a new build of this image to us.gcr.io/broad-dsp-lrma/lr-trgt. If done, the TRGT.wdl task should be updated to use that container as well.

Added logic to run the TRGT sub-workflow as part of the HiFi variant calling workflow

Updated trgt to v0.8.0 and added T2T repeat catalog

Update TRGT to use v0.8.0 and to allow karyotype-specific analyses

Version bump

updated trgt pipeline to support karyotype-specific calling

Correct repeat catalog filename

T2T example

Corrected values in example