Update supported Python versions (#309)

* Update supported Python versions

* ignore deprecation warning

.github/workflows/test_and_deploy.yml

@@ -26,16 +26,17 @@ jobs:
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
-        # Run across a mixture of Python versions and operating systems
+        # Run all supported Python versions on linux
+        os: [ubuntu-latest]
+        python-version: ["3.10", "3.11", "3.12"]
+        # Include one windows and two macOS (intel based and arm based) runs
         include:
-        - os: ubuntu-latest
-          python-version: "3.11"
-        - os: macos-13 # Intel Mac
-          python-version: "3.11"
-        - os: macos-latest # ARM Mac
-          python-version: "3.10"
-        - os: windows-latest
-          python-version: "3.9"
+          - os: macos-13
+            python-version: "3.12"
+          - os: macos-latest
+            python-version: "3.12"
+          - os: windows-latest
+            python-version: "3.12"
 
     steps:
       - name: Cache atlases

pyproject.toml

@@ -12,11 +12,12 @@ classifiers = [
     "Intended Audience :: Science/Research",
     "Operating System :: OS Independent",
     "Programming Language :: Python",
-    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3",
     "Programming Language :: Python :: 3.10",
-    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
 ]
-requires-python = ">=3.9"
+requires-python = ">=3.10"
 dependencies = [
     "brainglobe-space >= 1.0.0",
     "click",
@@ -78,11 +79,16 @@ exclude = ["tests*"]
 
 [tool.pytest.ini_options]
 addopts = "--cov=brainglobe_atlasapi"
-filterwarnings = ["error"]
+filterwarnings = [
+    "error",
+    "ignore::UserWarning",
+    # note the use of single quote below to denote "raw" strings in TOML
+    'ignore: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior',
+]
 markers = ["slow: marks tests as slow (deselect with '-m \"not slow\"')"]
 
 [tool.black]
-target-version = ['py39', 'py310', 'py311']
+target-version = ['py310','py311', 'py312']
 skip-string-normalization = false
 line-length = 79
 
@@ -99,13 +105,13 @@ select = ["I", "E", "F"]
 [tool.tox]
 legacy_tox_ini = """
 [tox]
-envlist = py{39,310,311}
+envlist = py{310,311,312}
 
 [gh-actions]
 python =
-    3.9: py39
     3.10: py310
     3.11: py311
+    3.12: py312
 
 [testenv]
 extras =