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Add support for MKL pardiso in meson build. #206

Add support for MKL pardiso in meson build.

Add support for MKL pardiso in meson build. #206

Workflow file for this run

name: build
on:
pull_request:
push:
branches:
- master
tags:
- '*'
jobs:
cleanup-runs:
runs-on: ubuntu-latest
steps:
- uses: rokroskar/workflow-run-cleanup-action@master
env:
GITHUB_TOKEN: "${{ secrets.GITHUB_TOKEN }}"
if: "!startsWith(github.ref, 'refs/tags/') && github.ref != 'refs/heads/master'"
build_openmp:
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash -l {0}
strategy:
fail-fast: false
matrix:
os: [ ubuntu-latest ]
python-version: [ 3.7, 3.8, 3.9, "3.10", "3.11" ]
env:
PYTHON_VERSION: ${{ matrix.python-version }}
steps:
- uses: actions/checkout@v3
with:
submodules: recursive
- uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
python-version: ${{ matrix.python-version }}
miniforge-version: latest
channels: conda-forge,anaconda
- name: Install dependencies
run: |
conda install scipy numpy pytest
- name: Test
run: |
python legacy_setup.py install --scs --openmp
pytest
rm -rf build/
build:
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash -l {0}
strategy:
fail-fast: false
matrix:
os: [ ubuntu-latest, macos-13, windows-latest ]
python-version: [ 3.7, 3.8, 3.9, "3.10", "3.11", "3.12"]
link_mkl: [true, false]
env:
PYTHON_VERSION: ${{ matrix.python-version }}
LINK_MKL: ${{ matrix.link_mkl }}
steps:
- uses: actions/checkout@v3
with:
submodules: recursive
- name: Set Additional Envs
shell: bash
run: |
echo "DEPLOY=$( [[ $GITHUB_EVENT_NAME == 'push' && $GITHUB_REF == 'refs/tags'* ]] && echo 'True' || echo 'False' )" >> $GITHUB_ENV
- uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
python-version: ${{ matrix.python-version }}
miniforge-version: latest
channels: conda-forge,anaconda
- name: Install dependencies
run: |
if [[ "$LINK_MKL" == "true" ]]; then
BLAS_PKGS="blas-devel=*=*mkl"
else
BLAS_PKGS="blas-devel=*=*openblas"
fi
if [[ "$PYTHON_VERSION" == "3.7" ]] || [[ "$PYTHON_VERSION" == "3.8" ]] || [[ "$PYTHON_VERSION" == "3.9" ]]; then
conda install scipy=1.5 numpy=1.19 pytest $BLAS_PKGS pkg-config
elif [[ "$PYTHON_VERSION" == "3.10" ]]; then
conda install scipy=1.7 numpy=1.21 pytest $BLAS_PKGS pkg-config
elif [[ "$PYTHON_VERSION" == "3.11" ]]; then
conda install scipy=1.9.3 numpy=1.23.4 pytest $BLAS_PKGS pkg-config
elif [[ "$PYTHON_VERSION" == "3.12" ]]; then
conda install scipy numpy pytest $BLAS_PKGS pkg-config
fi
- name: Build
run: |
if [[ "$PYTHON_VERSION" == "3.7" ]] || [[ "$PYTHON_VERSION" == "3.8" ]]; then
if [[ "$LINK_MKL" == "true" ]]; then
python legacy_setup.py install --scs --mkl
else
python legacy_setup.py install
fi
elif [[ "$PYTHON_VERSION" != "3.7" ]] && [[ "$PYTHON_VERSION" != "3.8" ]]; then
python -c "import numpy as np; print('NUMPY BLAS INFOS'); print(np.show_config())"
if [[ "$LINK_MKL" == "true" ]]; then
python -m pip install --verbose -Csetup-args=-Dlink_mkl=true .
else
python -m pip install --verbose .
fi
fi
- name: Test
run: |
pytest
rm -rf build/
- name: Build and test windows wheels
if: ${{startsWith(matrix.os, 'windows') && !matrix.link_mkl}}
run: |
python -m pip install build
python -m build -Csetup-args="-Dlink_blas_statically=True"
python -m pip install delvewheel
delvewheel repair dist/*whl
conda remove openblas # to check static linkage
pip install wheelhouse/*whl --force-reinstall
pytest
- name: Upload artifacts to github
if: ${{env.DEPLOY == 'True' && startsWith(matrix.os, 'windows')}}
uses: actions/upload-artifact@v1
with:
name: wheels
path: ./wheelhouse
build_wheels:
needs: build
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ ubuntu-latest, macos-13 ]
python-version: [ 3.7, 3.8, 3.9, "3.10", "3.11", "3.12"]
env:
RUNNER_OS: ${{ matrix.os }}
PYTHON_VERSION: ${{ matrix.python-version }}
steps:
- uses: actions/checkout@v3
with:
submodules: recursive
- uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Set Additional Envs
shell: bash
run: |
echo "PYTHON_SUBVERSION=$(echo $PYTHON_VERSION | cut -c 3-)" >> $GITHUB_ENV
echo "SINGLE_ACTION_CONFIG=$( [[ $PYTHON_VERSION == 3.8 && $RUNNER_OS == 'macOS' ]] && echo 'True' || echo 'False' )" >> $GITHUB_ENV
echo "DEPLOY=$( [[ $GITHUB_EVENT_NAME == 'push' && $GITHUB_REF == 'refs/tags'* ]] && echo 'True' || echo 'False' )" >> $GITHUB_ENV
- name: Build wheels
env:
CIBW_MANYLINUX_X86_64_IMAGE: manylinux2014
CIBW_BUILD: "cp3${{env.PYTHON_SUBVERSION}}-*"
CIBW_SKIP: "*-win32 *-manylinux_i686 *-musllinux*"
CIBW_BEFORE_ALL_LINUX: yum install -y openblas-devel
CIBW_BEFORE_ALL_MACOS: >
brew install openblas &&
cp -r /usr/local/opt/openblas/lib/* /usr/local/lib &&
cp /usr/local/opt/openblas/include/* /usr/local/include
CIBW_ENVIRONMENT_MACOS: CFLAGS='-Wno-error=implicit-function-declaration'
CIBW_BUILD_VERBOSITY: 3
CIBW_TEST_REQUIRES: pytest
CIBW_TEST_COMMAND: pytest {package}
uses: joerick/[email protected]
- name: Build source
if: ${{env.SINGLE_ACTION_CONFIG == 'True'}}
run: |
python -m pip install build
python -m build -Csetup-args="-Dlink_blas_statically=True" --outdir=wheelhouse
- name: Upload artifacts to github
if: ${{env.DEPLOY == 'True'}}
uses: actions/upload-artifact@v1
with:
name: wheels
path: ./wheelhouse
upload_wheels:
needs: build_wheels
runs-on: ubuntu-latest
env:
PYPI_SERVER: ${{ secrets.PYPI_SERVER }}
PYPI_USER: ${{ secrets.PYPI_USER }}
PYPI_PASSWORD: ${{ secrets.PYPI_PASSWORD }}
steps:
- uses: actions/checkout@v3
- uses: actions/setup-python@v2
with:
python-version: 3.8
- name: Set Additional Envs
shell: bash
run: |
echo "DEPLOY=$( [[ $GITHUB_EVENT_NAME == 'push' && $GITHUB_REF == 'refs/tags'* ]] && echo 'True' || echo 'False' )" >> $GITHUB_ENV
- uses: actions/download-artifact@v2
if: ${{env.DEPLOY == 'True'}}
with:
name: wheels
path: ./wheelhouse
- name: Release to pypi
if: ${{env.DEPLOY == 'True'}}
shell: bash
run: |
python -m pip install --upgrade twine
twine check wheelhouse/*
twine upload --skip-existing --repository-url $PYPI_SERVER wheelhouse/* -u $PYPI_USER -p $PYPI_PASSWORD