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Biological and Medical Big data Mining Lab

Biological and Medical Big data Mining Lab

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  1. DeepCRISPR DeepCRISPR Public

    Python 58 31

  2. PanPep PanPep Public

    Python 44 9

  3. pTuneos pTuneos Public

    pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data

    Python 34 8

  4. scLearn scLearn Public

    scLearn：Learning for single cell assignment

    R 34 9

  5. X-MOL X-MOL Public

    Python 31 10

  6. scMVP scMVP Public

    Python 28 11

Repositories

Showing 10 of 49 repositories
  • SpaLinker Public
    bm2-lab/SpaLinker’s past year of commit activity
    R 1 0 0 0 Updated Nov 24, 2024
  • STAMP Public
    bm2-lab/STAMP’s past year of commit activity
    Python 5 GPL-3.0 1 3 0 Updated Nov 12, 2024
  • PerturBase Public

    The most comprehensive database designed for the analysis and visualization of single cell perturbation data

    bm2-lab/PerturBase’s past year of commit activity
    Python 3 GPL-3.0 1 2 0 Updated Nov 7, 2024
  • SCMMI_Benchmark Public
    bm2-lab/SCMMI_Benchmark’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Nov 6, 2024
  • CausCell Public
    bm2-lab/CausCell’s past year of commit activity
    Python 2 GPL-3.0 0 0 0 Updated Oct 23, 2024
  • CRISPR-viva Public
    bm2-lab/CRISPR-viva’s past year of commit activity
    Python 0 Apache-2.0 1 0 0 Updated Oct 21, 2024
  • SCMMIB-reproducibility Public
    bm2-lab/SCMMIB-reproducibility’s past year of commit activity
    R 0 MIT 0 0 0 Updated Oct 5, 2024
  • SCMMIB_pipeline Public
    bm2-lab/SCMMIB_pipeline’s past year of commit activity
    Jupyter Notebook 2 MIT 0 0 0 Updated Oct 4, 2024
  • scMVP Public
    bm2-lab/scMVP’s past year of commit activity
    Python 28 MIT 11 6 0 Updated Sep 21, 2024
  • PathoTME Public

    Genomics-guided Representation Learning for Pathologic Pan-cancer Tumor Microenvironment Subtype Prediction (MICCAI 2024 oral)

    bm2-lab/PathoTME’s past year of commit activity
    Python 3 1 0 0 Updated Sep 15, 2024
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