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Releases: biowdl/somatic-variantcalling

Release 2.2.1

22 Jul 07:42
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  • Update number of tasks: add memory runtime

Release 2.2.0

16 Jul 09:45
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  • Various stability fixes in tasks.

Release 2.1.0

06 Aug 11:04
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  • Default docker images have been updated to newer versions.
  • Replace biopet-scatterregions with scatter-regions tool from chunked-scatter.
  • Tasks were updated to contain the time_minutes runtime attribute and
    associated timeMinutes input, describing the maximum time the task will
    take to run.

Release 2.0.0

31 Mar 13:35
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  • Move commonly used inputs to the top-level workflow inputs sections in order
    to work better with cromwell 48 and higher.
  • Add proper copyright headers to WDL files. So the free software license
    is clear to end users who wish to adapt and modify.
  • Added "rna" and "exome" inputs to strelka.
  • Added inputs oveviews to docs.
  • Added parameter_meta.
  • Added miniwdl to linting.

Release 1.1.0

09 Oct 14:12
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  • Update tasks so they pass the correct memory requirements to the
    execution engine. Memory requirements are set on a per-task (not
    per-core) basis.
  • Mutect2: Filtered output no longer overwrites unfiltered mutect2 output

v1.0.0

25 Sep 14:31
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Release 1.0