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"markdown": "---\ntitle: \"Alignment of 3D volumes with Optimal Transport\"\nsubtitle: \"Application to cryoEM density maps\"\n\nengine: \"jupyter\"\nauthor:\n - name: \"Clément Soubrier\" \n email: \"c.soubrier @math.ubc.ca\"\n affiliations:\n - name: KDD Group\n url: \"https://rtviii.xyz/\"\n\n - name: \"Khanh Dao Duc\" \n email: \"[email protected]\"\n affiliations:\n - name: Department of Mathematics, UBC\n url: \"https://www.math.ubc.ca/\"\n - name: Department of Computer Science, UBC\n url: \"https://www.cs.ubc.ca/\"\n\ndate: \"July 16 2024\"\ncategories: [biology, bioinformatics] \n\ncallout-icon: false\n# format:\n# pdf:\n# include-in-header:\n# text: |\n# \\usepackage{amsmath}\n\nexecute:\n echo: false\n freeze: auto\n pip: [\"pyvista\", \"open3d\", \"scikit-learn\", \"mendeleev\", \"compas\", \"matplotlib\"]\n\n---\n\n", | ||
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