Add multi-user support for all genes cached table

bioinfodlsu · Sep 14, 2023 · 2583d3d · 2583d3d
1 parent 1d5a270
commit 2583d3d
Showing 1 changed file with 9 additions and 1 deletion.
diff --git a/callbacks/lift_over/util.py b/callbacks/lift_over/util.py
@@ -559,8 +559,16 @@ def get_all_genes(refs, genomic_intervals):
 
     else:
         make_dir(temp_output_dir)
+        FILENAME = f'{temp_output_dir}/all_genes.csv'
+        FILENAME_WITH_TIMESTAMP = append_timestamp_to_filename(FILENAME)
+
         all_genes = get_all_genes_if_not_exist(refs, nb_intervals)
-        all_genes.to_csv(f'{temp_output_dir}/all_genes.csv', index=False)
+        all_genes.to_csv(FILENAME_WITH_TIMESTAMP, index=False)
+        try:
+            os.replace(FILENAME_WITH_TIMESTAMP, FILENAME)
+        except:
+            pass
+
         return all_genes