update license headers

bioimage-io · Nov 20, 2024 · 7ea0a4c · 7ea0a4c
1 parent 3c04a3e
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diff --git a/src/main/java/io/bioimage/modelrunner/apposed/appose/CondaException.java b/src/main/java/io/bioimage/modelrunner/apposed/appose/CondaException.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.apposed.appose;
 
 //TODO remove once appose project is released with the needed changes

diff --git a/src/main/java/io/bioimage/modelrunner/apposed/appose/FilePaths.java b/src/main/java/io/bioimage/modelrunner/apposed/appose/FilePaths.java
@@ -1,29 +1,20 @@
 /*-
  * #%L
- * Appose: multi-language interprocess cooperation with shared memory.
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2023 Appose developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
- * Redistribution and use in source and binary forms, with or without
- * modification, are permitted provided that the following conditions are met:
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
  * 
- * 1. Redistributions of source code must retain the above copyright notice,
- *    this list of conditions and the following disclaimer.
- * 2. Redistributions in binary form must reproduce the above copyright notice,
- *    this list of conditions and the following disclaimer in the documentation
- *    and/or other materials provided with the distribution.
+ *      http://www.apache.org/licenses/LICENSE-2.0
  * 
- * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
- * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
- * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
- * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
- * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
- * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
- * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
- * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
- * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
- * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
- * POSSIBILITY OF SUCH DAMAGE.
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
  * #L%
  */
 

diff --git a/src/main/java/io/bioimage/modelrunner/apposed/appose/MambaInstallException.java b/src/main/java/io/bioimage/modelrunner/apposed/appose/MambaInstallException.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.apposed.appose;
 
 /**

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/BioimageioRepo.java b/src/main/java/io/bioimage/modelrunner/bioimageio/BioimageioRepo.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/BioEngineAvailableModels.java b/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/BioEngineAvailableModels.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/BioengineInterface.java b/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/BioengineInterface.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/tensor/BioEngineOutput.java b/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/tensor/BioEngineOutput.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/tensor/BioEngineOutputArray.java b/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/tensor/BioEngineOutputArray.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/tensor/BioengineTensor.java b/src/main/java/io/bioimage/modelrunner/bioimageio/bioengine/tensor/BioengineTensor.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/Author.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/Author.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/Axes.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/Axes.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.bioimageio.description;
 
 import java.util.List;

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxesV04.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxesV04.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.bioimageio.description;
 
 import java.util.ArrayList;

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxesV05.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxesV05.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.bioimageio.description;
 
 import java.util.ArrayList;

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/Axis.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/Axis.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.bioimageio.description;
 
 import java.util.List;

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxisSize.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxisSize.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.bioimageio.description;
 
 import java.util.Map;

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxisV04.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxisV04.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.bioimageio.description;
 
 import java.util.List;

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxisV05.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/AxisV05.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.bioimageio.description;
 
 import java.util.List;

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/Badge.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/Badge.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/Cite.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/Cite.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/ExecutionConfig.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/ExecutionConfig.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/InputData.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/InputData.java
@@ -1,3 +1,22 @@
+/*-
+ * #%L
+ * Use deep learning frameworks from Java in an agnostic and isolated way.
+ * %%
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
+ * %%
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ * 
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ * #L%
+ */
 package io.bioimage.modelrunner.bioimageio.description;
 
 import java.util.Map;

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/ModelDescriptor.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/ModelDescriptor.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/ModelDescriptorFactory.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/ModelDescriptorFactory.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/ModelDescriptorV04.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/ModelDescriptorV04.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.

diff --git a/src/main/java/io/bioimage/modelrunner/bioimageio/description/ModelDescriptorV05.java b/src/main/java/io/bioimage/modelrunner/bioimageio/description/ModelDescriptorV05.java
@@ -2,7 +2,7 @@
  * #%L
  * Use deep learning frameworks from Java in an agnostic and isolated way.
  * %%
- * Copyright (C) 2022 - 2023 Institut Pasteur and BioImage.IO developers.
+ * Copyright (C) 2022 - 2024 Institut Pasteur and BioImage.IO developers.
  * %%
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.