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Installation error "pip's dependency resolver does not currently take into account all the packages that are installed."
bug
Something isn't working
external
issues/bugs with other libraries, frameworks, etc.; might include reproducing an issue minimally
#330
opened Jan 18, 2024 by
ivanllampy
Qurro crashes with ultra high dimensional readouts
optimization
Making code faster or cleaner
question
Further information is requested
#329
opened Jun 23, 2023 by
mortonjt
Update the README to specify which Qurro version should be installed based on your QIIME 2 version
docs
README, tutorials, demos, etc.
#328
opened Apr 22, 2023 by
fedarko
conda-forge recipe now requires Python >= 3.7, < 3.8.0a0 -- this prevents installation from conda into QIIME 2 environments
bug
Something isn't working
external
issues/bugs with other libraries, frameworks, etc.; might include reproducing an issue minimally
#327
opened Oct 21, 2022 by
fedarko
Save multiple log-ratio selections before exporting
enhancement
New feature or request
#321
opened Mar 14, 2022 by
mestaki
Discuss log-ratio generalizability / training and test splits in a tutorial?
docs
README, tutorials, demos, etc.
question
Further information is requested
#317
opened Jul 17, 2021 by
fedarko
Move "Apply" button for autoselection down a block and center it
enhancement
New feature or request
#309
opened Jun 30, 2020 by
fedarko
Add inverse of "contains text separated by |" option
enhancement
New feature or request
#308
opened Jun 8, 2020 by
fedarko
Add nicer API for using Qurro outside of QIIME 2 but from within Python
enhancement
New feature or request
interoperability
Making Qurro work well with other bioinformatics tools
#307
opened May 29, 2020 by
fedarko
Split up taxonomy annotations into multiple columns, one for each level
backburner
Low-priority things that are still good to keep track of
enhancement
New feature or request
#305
opened May 25, 2020 by
fedarko
Support textual searching via regular expressions
enhancement
New feature or request
#302
opened May 4, 2020 by
gibsramen
Support configuring circle size in the sample plot
enhancement
New feature or request
#299
opened Apr 24, 2020 by
fedarko
Better rank plot colorschemes for accommodating users with colorblindness
enhancement
New feature or request
#298
opened Apr 14, 2020 by
fedarko
Add more context to demo datasets
administrative
Logistical matters that don't have much or anything to do with code
docs
README, tutorials, demos, etc.
Adjust matching to be more consistent to Emperor/Empress
enhancement
New feature or request
interoperability
Making Qurro work well with other bioinformatics tools
Boxplots don't work in Safari
bug
Something isn't working
external
issues/bugs with other libraries, frameworks, etc.; might include reproducing an issue minimally
#294
opened Mar 17, 2020 by
fedarko
Document precision losses in metadata/etc. for standalone Qurro
bug
Something isn't working
docs
README, tutorials, demos, etc.
external
issues/bugs with other libraries, frameworks, etc.; might include reproducing an issue minimally
#293
opened Mar 14, 2020 by
fedarko
Export all feature ranking/metadata column info for selected features
enhancement
New feature or request
#292
opened Mar 11, 2020 by
fedarko
If you leave the boxplot checkbox checked, then navigate "back" from the page, then navigate "forwards" to return to the Qurro plot, then the sample plot doesn't show up as a boxplot
bug
Something isn't working
#291
opened Mar 11, 2020 by
fedarko
Add "data sources" links / references to the bottom for the color composition data and TCGA data
administrative
Logistical matters that don't have much or anything to do with code
Adjust "make notebooks" command to fail when an external command fails
administrative
Logistical matters that don't have much or anything to do with code
backburner
Low-priority things that are still good to keep track of
bug
Something isn't working
#289
opened Mar 10, 2020 by
fedarko
Add option to lock log-ratio axis
enhancement
New feature or request
#288
opened Mar 9, 2020 by
gibsramen
Add filtering step to >= 11 week-old mice in DEICODE sleep apnea tutorials
docs
README, tutorials, demos, etc.
#287
opened Mar 7, 2020 by
fedarko
Add TCGA and color composition datasets to Qurro demos
backburner
Low-priority things that are still good to keep track of
docs
README, tutorials, demos, etc.
When you zoom in super far on the rank plot, the display breaks a bit
backburner
Low-priority things that are still good to keep track of
bug
Something isn't working
external
issues/bugs with other libraries, frameworks, etc.; might include reproducing an issue minimally
#284
opened Mar 4, 2020 by
fedarko
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