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Welcome to the BGE (Blended Genome Exome) Analysis Wiki!

Tutorials with steps for running post-imputation QC followed by PRS (GWAS coming soon).

Must have the following installed:

• Hail
• Python3
• Jupyter Notebook
• Plink2
• R / RStudio

Requires access to the Terra PUMAS_Analysis_Resources workspace. Access to a high-performance computing cluster or cloud system highly recommended.

See following for relevant Terra file paths: file_paths.txt