only use input file size to estimate storage for the filling AC,AN tags

atgu · Feb 14, 2024 · aff683a · aff683a
1 parent 5623f5a
commit aff683a
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/gwaspy/phasing/shapeit5_phase.py b/gwaspy/phasing/shapeit5_phase.py
@@ -282,7 +282,7 @@ def concatenate_rare_chunks(
                 b=batch,
                 vcf=chrom_vcf,
                 region=f'chr{i}',
-                storage=round(vcf_size*1.5 + ref_size + 2)
+                storage=round(vcf_size*1.5 + 2)
             ).annotated_vcf
 
         if data_type == 'array':