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Refacto of the extensions #844

Refacto of the extensions

Refacto of the extensions #844

Workflow file for this run

name: Tests and Linting
on:
pull_request:
push:
branches: [master]
jobs:
Linting:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
- name: Set PY variable
run: echo "PY=$(python -VV | sha256sum | cut -d' ' -f1)" >> $GITHUB_ENV
- uses: actions/cache@v2
with:
path: ~/.cache/pre-commit
key: pre-commit|${{ env.PY }}|${{ hashFiles('.pre-commit-config.yaml') }}
- name: Install pre-commit
run: |
pip install pre-commit
pre-commit install
- name: Run pre-commit
run: SKIP=no-commit-to-branch pre-commit run --all-files
Pytest:
runs-on: ubuntu-latest
strategy:
fail-fast: true
matrix:
python-version: ["3.7", "3.8", "3.9"]
steps:
- uses: actions/checkout@v2
- name: Cache downloaded resources
uses: actions/cache@v3
with:
path: ~/.data/
key: resources
- name: Set up Java
uses: actions/setup-java@v2
with:
distribution: "temurin" # See 'Supported distributions' for available options
java-version: "8"
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
architecture: x64
- name: Install dependencies
run: |
pip install --upgrade pip
pip install -e '.[dev,setup]'
- name: Test with Pytest on Python ${{ matrix.python-version }}
env:
UMLS_API_KEY: ${{ secrets.UMLS_API_KEY }}
run: python -m pytest --cov edsnlp --cov-report xml --ignore tests/test_docs.py
if: matrix.python-version != '3.9'
- name: Test with Pytest on Python ${{ matrix.python-version }}
env:
UMLS_API_KEY: ${{ secrets.UMLS_API_KEY }}
run: python -m pytest --cov edsnlp --cov-report xml
if: matrix.python-version == '3.9'
- name: Upload coverage
uses: codecov/codecov-action@v2
if: matrix.python-version == '3.9'
Documentation:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
with:
python-version: "3.9"
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install '.[dev]'
- name: Build documentation
run: |
mkdocs build --clean
Installation:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.7", "3.8", "3.9"]
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install library
run: |
pip install .