Bioclean edit

[svittoz]

Description

This PR intends to fix some issues related to bioclean module and to make it easier to use while keeping core functionalities.

• Make the biology pipeline more direct (prepare_measurement_table and plot_biology_summary are now independent functions)
• Prepare_measurement_table is inspired from EDS-Teva prepare_df module.
• Units configuration is no longer set with a pre-defined file but in the ConceptSet definition
• Docstring for some functions
• Updated and validated concept sets

Checklist

• If this PR is a bug fix, the bug is documented in the test suite.
• Changes were documented in the changelog (pending section).
• If necessary, changes were made to the documentation (eg new pipeline).

[Thomzoy]

TMP

It's a very nice PR ! I'm writing down some temporary remarks regarding the doc here:

• Try adding the blacken-docs to the precommit ? For better visibility of code snippets in the documentation
• [Fixed] Problem with tables rendering when clicking to full page
• Uniformize name of cards VS name in the navigation menu
• Regarding naming, do we keep prepare_measurement for the main function name ?

[Thomzoy]

Thanks a lot for the work, we can merge !