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Issues list

Mice TCRs specific to B16 melanoma neoantigens (Shagina et al. 2024) vdj-db-alternative-datasets
#397 opened Nov 20, 2024 by LuppovDaniil
@LuppovDaniil
PMID: 39394480
#396 opened Oct 29, 2024 by LuppovDaniil
pgen as vdjdb score vdjdb-build-infrastructure VDJdb aggregation, compilation and proofreading infrastructure development
#395 opened Oct 29, 2024 by LuppovDaniil
@LuppovDaniil
Wrong HLA info for "ASNENMETM" epitope vdjdb-typos Minor typos to fix
#394 opened Oct 9, 2024 by dagfeller
@LuppovDaniil
1
CI/CD vdjdb-build-infrastructure VDJdb aggregation, compilation and proofreading infrastructure development
#393 opened Sep 25, 2024 by LuppovDaniil
@LuppovDaniil
PMID:39286976 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#392 opened Sep 23, 2024 by LuppovDaniil
@LuppovDaniil
PMID: 39258910
#391 opened Sep 17, 2024 by LuppovDaniil
duplicated dataset duplicate A duplicate issue
#390 opened Sep 16, 2024 by LuppovDaniil
VDJ genes nomenclature vdjdb-build-infrastructure VDJdb aggregation, compilation and proofreading infrastructure development
#389 opened Sep 10, 2024 by LuppovDaniil
@LuppovDaniil
PMID:36778273 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#388 opened Aug 29, 2024 by LuppovDaniil
PMID:39043656 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#387 opened Aug 29, 2024 by LuppovDaniil
PMID:38898278 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#385 opened Aug 29, 2024 by LuppovDaniil
PMID:34811538 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#382 opened Aug 7, 2024 by LuppovDaniil
PMID:34433824 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#381 opened Aug 1, 2024 by LuppovDaniil
@LuppovDaniil
PMID:39074636 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#380 opened Aug 1, 2024 by LuppovDaniil
@LuppovDaniil
PMID:25157096 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#379 opened Aug 1, 2024 by LuppovDaniil
PMID:38866784 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#377 opened Jun 15, 2024 by LuppovDaniil
@LuppovDaniil
PMID:38744246 vdj-10x-immudex scRNA-seq dataset prepared using 10X Genomics kit (or similar) + UMI-tagged MHC-multimers vdjdb-records-associations Inferred (directly or indirectly) antigen receptor:condition associations.
#376 opened Jun 9, 2024 by mikessh
PMID:38762592 vdj-10x scRNA-seq dataset prepared using 10X Genomics kit (or similar) with TCR/BCR vdjdb-records-associations Inferred (directly or indirectly) antigen receptor:condition associations.
#375 opened Jun 9, 2024 by mikessh
Re-evaluate HLA restriction vdjdb-build-summary VDJdb summary report generation infrastructure development vdjdb-records-formatting&proofreading Typos and errors that need to be fixed in one or multiple VDJdb records
#372 opened Jun 1, 2024 by mikessh
Associations from previously published studies, aggregated and listed elsewhere vdjdb-records-associations Inferred (directly or indirectly) antigen receptor:condition associations. vdjdb-records-meta-paper A paper listing several studies and datasets that can be imported into VDJdb
#371 opened Jun 1, 2024 by mikessh
PMID:38571941 vdjdb-records-associations Inferred (directly or indirectly) antigen receptor:condition associations. vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#370 opened Jun 1, 2024 by mikessh
antigen.gene / antigen.species mix up for some human epitopes vdjdb-records-formatting&proofreading Typos and errors that need to be fixed in one or multiple VDJdb records
#368 opened May 30, 2024 by JamieHeather
1
PMID:38508137 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#367 opened May 30, 2024 by mikessh
@mikessh @LuppovDaniil
Migrate build from Docker to Podman vdjdb-build-infrastructure VDJdb aggregation, compilation and proofreading infrastructure development vdjdb-maintainance Critical issues requiring complex maintenance works
#366 opened May 30, 2024 by mikessh
@LuppovDaniil
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