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Merge pull request #55 from anergictcell/release/0.9.0
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Version bump to 0.9.0
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anergictcell authored Mar 27, 2024
2 parents 57c7871 + f5cfa6f commit 1f42435
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2 changes: 1 addition & 1 deletion Cargo.toml
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[package]
name = "hpo"
version = "0.8.3"
version = "0.9.0"
edition = "2021"
authors = ["Jonas Marcello <[email protected]>"]
description = "Human Phenotype Ontology Similarity"
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -45,7 +45,7 @@ Some (more or less random) examples are included in the [`examples` folder](http

HPO data must be downloaded first from [Jax HPO](https://hpo.jax.org/) itself. You need the following files:
- [phenotype.hpoa](https://hpo.jax.org/app/data/annotations) available as "Download HPO annotations" (Required to connect `OmimDisease` to `HpoTerm`s
- [phenotype_to_genes.txt](https://hpo.jax.org/app/data/annotations) available as "Phenotype to genes" (Required to connect `Gene` to `HpoTerm`)
- [genes_to_phenotype.txt](https://hpo.jax.org/app/data/annotations) available as "Genes to Phenotype" (Required to connect `Gene` to `HpoTerm`)
- [hp.obo](https://hpo.jax.org/app/data/ontology) (Required for `HpoTerm`s and their connection to each other)

1. Data can be loaded directly from the code with [`Ontology::from_standard`]:
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