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Andreas Grigorjew committed Apr 6, 2023
1 parent 55d0279 commit 3b7bf69
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion src/main.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -34,7 +34,7 @@ int64_t print_usage(char **argv, int64_t help) {
std::cout << "\t-r, --reference \tProtein identity, selects reference protein. By default, this is the first protein.\n";
std::cout << "\t-w, --drawgraph \tReturns dot code files of all alignments for plotting the Delta suboptimal subgraph (for debug purposes).\n";
std::cout << "\t-k, --alignments \tNon-negative integer n, create a fasta file containing randomly chosen n suboptimal alignments. (Default: 0)\n";
std::cout << "\t-m, --windowmerge \tMerge safety windows if they intersect or are adjacent. EMERALD prints both merged and unmerged safety windows if this option is in use. (Default: Off)\n"
std::cout << "\t-m, --windowmerge \tMerge safety windows if they intersect or are adjacent. EMERALD prints both merged and unmerged safety windows if this option is in use. (Default: Off)\n";
std::cout << "\t-h, --help \tShows this help message.\n";
return help;
}
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