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Devops: Add tox environment that runs tests with sqlite backend #9138

Devops: Add tox environment that runs tests with sqlite backend

Devops: Add tox environment that runs tests with sqlite backend #9138

Workflow file for this run

name: ci-code
on:
push:
branches-ignore: [gh-pages]
pull_request:
branches-ignore: [gh-pages]
paths-ignore: [docs/**]
# https://docs.github.com/en/actions/using-jobs/using-concurrency
concurrency:
# only cancel in-progress jobs or runs for the current workflow - matches against branch & tags
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
env:
FORCE_COLOR: 1
jobs:
check-requirements:
runs-on: ubuntu-latest
timeout-minutes: 5
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.12
uses: actions/setup-python@v5
with:
python-version: '3.12'
- name: Install utils/ dependencies
run: pip install -r utils/requirements.txt
- name: Check requirements files
id: check_reqs
run: python ./utils/dependency_management.py check-requirements DEFAULT
- name: Create commit comment
if: failure() && steps.check_reqs.outputs.error
uses: peter-evans/commit-comment@v3
with:
path: pyproject.toml
body: |
${{ steps.check_reqs.outputs.error }}
Click [here](https://github.com/aiidateam/aiida-core/wiki/AiiDA-Dependency-Management) for more information on dependency management.
tests:
needs: [check-requirements]
runs-on: ubuntu-latest
timeout-minutes: 45
strategy:
fail-fast: false
matrix:
python-version: ['3.9', '3.12']
services:
postgres:
image: postgres:10
env:
POSTGRES_DB: test_aiida
POSTGRES_PASSWORD: ''
POSTGRES_HOST_AUTH_METHOD: trust
options: >-
--health-cmd pg_isready
--health-interval 10s
--health-timeout 5s
--health-retries 5
ports:
- 5432:5432
rabbitmq:
image: rabbitmq:3.8.14-management
ports:
- 5672:5672
- 15672:15672
slurm:
image: xenonmiddleware/slurm:17
ports:
- 5001:22
steps:
- uses: actions/checkout@v4
- name: Install system dependencies
run: sudo apt update && sudo apt install postgresql graphviz
- name: Install aiida-core
uses: ./.github/actions/install-aiida-core
with:
python-version: ${{ matrix.python-version }}
- name: Setup environment
run: .github/workflows/setup.sh
- name: Run test suite
env:
AIIDA_TEST_PROFILE: test_aiida
AIIDA_WARN_v3: 1
AIIDA_PYTEST_SSH_KEY: ${{ runner.home }}/.ssh/id_rsa_aiida_pytest
# Python 3.12 has a performance regression when running with code coverage
# so run code coverage only for python 3.9.
run: pytest -v tests -m 'not nightly' ${{ matrix.python-version == '3.9' && '--cov aiida' || '' }}
- name: Upload coverage report
if: matrix.python-version == 3.9 && github.repository == 'aiidateam/aiida-core'
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}
name: aiida-pytests-py3.9
file: ./coverage.xml
fail_ci_if_error: false # don't fail job, if coverage upload fails
tests-presto:
needs: [check-requirements]
runs-on: ubuntu-latest
timeout-minutes: 20
steps:
- uses: actions/checkout@v4
- name: Install graphviz
run: sudo apt update && sudo apt install graphviz
- name: Install aiida-core
uses: ./.github/actions/install-aiida-core
with:
python-version: '3.11'
- name: Setup SSH on localhost
run: .github/workflows/setup_ssh.sh
- name: Setup upterm session
uses: lhotari/action-upterm@v1
- name: Run test suite
env:
AIIDA_WARN_v3: 0
AIIDA_PYTEST_SSH_KEY: ${{ runner.home }}/.ssh/id_rsa_aiida_pytest
run: pytest -m 'presto'
verdi:
needs: [check-requirements]
runs-on: ubuntu-latest
timeout-minutes: 10
steps:
- uses: actions/checkout@v4
- name: Install aiida-core
uses: ./.github/actions/install-aiida-core
with:
python-version: '3.12'
from-requirements: 'false'
- name: Run verdi tests
run: |
verdi devel check-load-time
verdi devel check-undesired-imports
.github/workflows/verdi.sh