Fixed tutorial.

aertslab · Apr 16, 2018 · 32afbdc · 32afbdc
1 parent 270eadc
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diff --git a/README.rst b/README.rst
@@ -252,7 +252,7 @@ In addition, the transcription factor is added to the module and modules that ha
 
 .. code-block:: python
 
-    modules = list(modules_from_adjacencies(adjacencies, ex_matrix, nomenclature=NOMENCLATURE))
+    modules = list(modules_from_adjacencies(adjacencies, ex_matrix.T, nomenclature=NOMENCLATURE))
 
 
 Phase II: Prune modules for targets with cis regulatory footprints (aka RcisTarget)

diff --git a/docs/index.rst b/docs/index.rst
@@ -251,7 +251,7 @@ In addition, the transcription factor is added to the module and modules that ha
 
 .. code-block:: python
 
-    modules = list(modules_from_adjacencies(adjacencies, ex_matrix, nomenclature=NOMENCLATURE))
+    modules = list(modules_from_adjacencies(adjacencies, ex_matrix.T, nomenclature=NOMENCLATURE))
 
 
 Phase II: Prune modules for targets with cis regulatory footprints (aka RcisTarget)