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Achievement: Pull SharkAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull SharkAchievement: Arctic Code Vault Contributor

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adamyhe/README.md

Hi there 👋

Computational biologist interested in applications of machine learning to transcriptional regulation, variant effect prediction, and population genetics.

Currently a PhD candidate in the Danko lab at Cornell University

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  1. Danko-Lab/clipnet Danko-Lab/clipnet Public

    A deep learning approach to predicting transcription initiation from sequence at single nucleotide resolution

    Python 9 2

  2. Danko-Lab/clipnet_paper Danko-Lab/clipnet_paper Public

    Scripts and notebooks to reproduce figures used in the CLIPNET paper

    Jupyter Notebook 2

  3. PersonalBPNet PersonalBPNet Public

    A small modification to bpnetlite's BPNet to accomodate large validation datasets.

    Python

  4. Danko-Lab/proseq2.0 Danko-Lab/proseq2.0 Public

    Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing

    Shell 24 11