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CentroMiner is refactored. It can receive gene annotation as well now. The output has only 2 folders now: TandemRepeat (fasta, gff3 of TR) and Candidate (candidate info and TR, TE, and gene content line chart, require ggplot2). TE data is removed from candidate info. It is recommended to check the line chart to decide which candidate you vote.
'--noplot' option is added to each module. With this option, any ploting will be skiped. If you have problem in graphical issue, try this option.
CloserScore in GapFiller detail is changed to CloserIdentity.
Due to the major changes, the web server version of quarTeT will not be updated to the newest version for now.
