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Zhuang Lab

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  1. storm-analysis storm-analysis Public

    STORM movie analysis code

    Python 116 92

  2. storm-control storm-control Public

    Microscope control software

    Python 66 68

  3. MERFISH_analysis MERFISH_analysis Public

    Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.

    MATLAB 48 32

  4. matlab-storm matlab-storm Public

    GUIs and functions for analyzing STORM data in MATLAB

    MATLAB 38 61

  5. MERlin MERlin Public

    Forked from emanuega/MERlin

    MERFISH decoding software

    Python 26 8

  6. Chromatin_Analysis_2020_cell Chromatin_Analysis_2020_cell Public

    Source codes and example scripts for chromatin tracing projects in Zhuang lab

    Jupyter Notebook 25 6

Repositories

Showing 10 of 14 repositories
  • Chromatin_Analysis_MOp Public

    Analysis codes and scripts for chromatin of MOp

    ZhuangLab/Chromatin_Analysis_MOp’s past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Sep 20, 2024
  • whole_mouse_brain_MERFISH_atlas_scripts_2023 Public
    ZhuangLab/whole_mouse_brain_MERFISH_atlas_scripts_2023’s past year of commit activity
    Jupyter Notebook 7 5 0 0 Updated Mar 29, 2024
  • storm-analysis Public

    STORM movie analysis code

    ZhuangLab/storm-analysis’s past year of commit activity
    Python 116 92 3 1 Updated Feb 23, 2024
  • storm-control Public

    Microscope control software

    ZhuangLab/storm-control’s past year of commit activity
    Python 66 68 17 1 Updated Oct 10, 2023
  • MERlin Public Forked from emanuega/MERlin

    MERFISH decoding software

    ZhuangLab/MERlin’s past year of commit activity
    Python 26 MIT 31 0 0 Updated Jun 26, 2023
  • SpatialBrainAgingCell22 Public
    ZhuangLab/SpatialBrainAgingCell22’s past year of commit activity
    Jupyter Notebook 11 4 0 0 Updated Dec 19, 2022
  • Epigenomic_MERFISH Public
    ZhuangLab/Epigenomic_MERFISH’s past year of commit activity
    MATLAB 2 0 0 0 Updated Oct 21, 2022
  • Chromatin_Analysis_2020_cell Public

    Source codes and example scripts for chromatin tracing projects in Zhuang lab

    ZhuangLab/Chromatin_Analysis_2020_cell’s past year of commit activity
    Jupyter Notebook 25 MIT 6 2 0 Updated Jan 27, 2022
  • MERFISH_analysis Public

    Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.

    ZhuangLab/MERFISH_analysis’s past year of commit activity
    MATLAB 48 32 4 1 Updated Aug 1, 2021
  • BICCN_MOp_2021 Public Forked from mengzhang1003/BICCN_MOp_2021
    ZhuangLab/BICCN_MOp_2021’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Apr 28, 2021
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