WaveSep

Official implementation of WaveSep: A Flexible Wavelet-based Approach for Source Separation in Susceptibility Imaging

WaveSep: A Flexible Wavelet-based Approach for Source Separation in Susceptibility Imaging (to appear in MLCN 2023)

Dependencies

Create and activate a new conda environment

conda create -n wavesep python==3.10
conda activate wavesep

Install necessary python packages

pip install -r requirements.txt

Usage

QSM source separation

python wavesep/qsm_sep.py --data <yml of input data>

The yml file contains the input data for QSM source separation. See data/yml/template_qsm.yml for more details. See data/yml/example_qsm.yml for an example.

STI source separation

python wavesep/sti_sep.py --data <yml of input data>

The yml file contains the input data for STI source separation. See data/yml/template_sti.yml for more details. See data/yml/example_sti.yml for an example.

Contact

If you have any questions, please contact me at

Zhenghan Fang

Email: [email protected]