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Long processing time during DRAM annotate, step "Getting forward best hits from kegg" Create Linear Issue #123: Issue #390 opened by ganiatgithub
November 21, 2024 20:58 15s
November 21, 2024 20:58 15s
Add nf-core style testing suite for the Nextflow side of the code Create Linear Issue #122: Issue #389 opened by madeline-scyphers
November 8, 2024 15:48 12s
November 8, 2024 15:48 12s
Add logging in python side of DRAM Create Linear Issue #121: Issue #388 opened by madeline-scyphers
November 8, 2024 15:47 15s
November 8, 2024 15:47 15s
Question about DRAM-v output Create Linear Issue #120: Issue #386 opened by deminatanja
November 5, 2024 12:23 15s
November 5, 2024 12:23 15s
Add much better logging throughout the pipeline Create Linear Issue #119: Issue #382 opened by madeline-scyphers
October 21, 2024 15:51 14s
October 21, 2024 15:51 14s
Add better input validation for input combinations that don't make sense Create Linear Issue #118: Issue #381 opened by madeline-scyphers
October 21, 2024 15:49 11s
October 21, 2024 15:49 11s
Create a DOI for the DRAM software with zenodo Create Linear Issue #117: Issue #380 opened by madeline-scyphers
October 17, 2024 22:33 12s
October 17, 2024 22:33 12s
input_fasta argument has to end with / otherwise fasta_fmt doesn't get appended properly Create Linear Issue #116: Issue #379 opened by madeline-scyphers
October 17, 2024 20:33 15s
October 17, 2024 20:33 15s
When writing outputs or logs, if already exists, append with something Create Linear Issue #115: Issue #378 opened by madeline-scyphers
October 17, 2024 19:04 16s
October 17, 2024 19:04 16s
All CLI help text defaults should pull from the config default, the config defualt instead of being hard coded Create Linear Issue #114: Issue #377 opened by madeline-scyphers
October 17, 2024 19:01 14s
October 17, 2024 19:01 14s
Add close inactive issue workflow/action Create Linear Issue #113: Issue #376 opened by madeline-scyphers
October 17, 2024 17:37 12s
October 17, 2024 17:37 12s
Setup milestones for tracking issues and development progress Create Linear Issue #112: Issue #375 opened by madeline-scyphers
October 17, 2024 16:44 12s
October 17, 2024 16:44 12s
DRAM visualization (product) tracking issue Create Linear Issue #111: Issue #374 opened by madeline-scyphers
October 17, 2024 16:07 14s
October 17, 2024 16:07 14s
DRAM v2 README has too much hard coded things in it (like the --help output) Create Linear Issue #110: Issue #373 opened by madeline-scyphers
October 17, 2024 15:52 14s
October 17, 2024 15:52 14s
DRAM trees and adjectives implementation Create Linear Issue #109: Issue #372 opened by madeline-scyphers
October 17, 2024 15:48 13s
October 17, 2024 15:48 13s
Better user Nextflow Configuration override Create Linear Issue #108: Issue #371 opened by madeline-scyphers
October 17, 2024 15:43 11s
October 17, 2024 15:43 11s
Update environment.yml Create Linear Issue #107: Issue #370 opened by madeline-scyphers
October 17, 2024 15:39 12s
October 17, 2024 15:39 12s
Integrate whatever we feel is useful from the nf-core template Create Linear Issue #106: Issue #369 opened by madeline-scyphers
October 17, 2024 15:28 14s
October 17, 2024 15:28 14s
Add back DRAM v1 testing suite for v2 Create Linear Issue #105: Issue #368 opened by madeline-scyphers
October 17, 2024 15:22 16s
October 17, 2024 15:22 16s
Update docs from Wiki for DRAM v2, probably move to readthedocs Create Linear Issue #104: Issue #367 opened by madeline-scyphers
October 17, 2024 15:18 12s
October 17, 2024 15:18 12s
Decouple DRAM v2 tool code from Nextflow code Create Linear Issue #103: Issue #366 opened by madeline-scyphers
October 17, 2024 15:13 16s
October 17, 2024 15:13 16s
KEGG db formatting process should allow passing in directory of pep files Create Linear Issue #102: Issue #365 opened by madeline-scyphers
October 17, 2024 14:52 15s
October 17, 2024 14:52 15s
Dram-v on Virsorter2 output: pandas error, unexpected EOF, syntax error Create Linear Issue #101: Issue #363 opened by deminatanja
October 11, 2024 07:41 17s
October 11, 2024 07:41 17s
ListUtil.c: loadable library and perl binaries are mismatched Create Linear Issue #100: Issue #362 opened by 473021677
October 6, 2024 08:48 10s
October 6, 2024 08:48 10s
State of DRAM2 Create Linear Issue #99: Issue #361 opened by donovan-parks
September 25, 2024 17:16 13s
September 25, 2024 17:16 13s