Issue with GATK 4.0

[gangcai]

It seems that GATK 4.0 don't have the file named GenomeAnalysisTK.jar , does this mean SeqMule currently only support GATK before this version?

Here is the build message:
$./Build gatk
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CAUTION: SeqMule cannot automatically install GATK due to license limitations.
Please download, unpack it and copy GenomeAnalysisTK.jar to
/home/bin/SeqMule/exe/gatk
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[kaichop]

you can use earlier version instead .

…

On Fri, Feb 9, 2018 at 3:07 PM, Gangcai Xie ***@***.***> wrote: It seems that GATK 4.0 don't have the file named GenomeAnalysisTK.jar , does this mean SeqMule currently only support GATK before this version? Here is the build message: $./Build gatk !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!! CAUTION: SeqMule cannot automatically install GATK due to license limitations. Please download, unpack it and copy GenomeAnalysisTK.jar to /home/bin/SeqMule/exe/gatk !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!! — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#168>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AFptuOuO2rjKo7BPMKclBL5PKoctYydKks5tTKWAgaJpZM4SAdwP> .