Skip to content

Commit

Permalink
deploy: a227009
Browse files Browse the repository at this point in the history
  • Loading branch information
@amrit110
amrit110 committed Nov 30, 2023
1 parent 83a45c0 commit 0b8092b
Show file tree
Hide file tree
Showing 9 changed files with 195 additions and 195 deletions.
2 changes: 1 addition & 1 deletion searchindex.js
View file

Large diffs are not rendered by default.

18 changes: 9 additions & 9 deletions tutorials/eicu.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -478,7 +478,7 @@ <h2>Imports and instantiate <code class="docutils literal notranslate"><span cla
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:57:47,714 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
2023-11-30 11:26:08,130 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -542,8 +542,8 @@ <h2>Example 1. Get all female patients discharged in 2014 (limit to 100 rows).<a
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:57:48,545 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 10:57:48,547 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.051502 s
2023-11-30 11:26:09,011 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 11:26:09,013 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.054849 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -578,8 +578,8 @@ <h2>Example 2. Get all patient encounters with diagnoses (<code class="docutils
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:57:48,647 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 10:57:48,648 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.080850 s
2023-11-30 11:26:09,118 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 11:26:09,120 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.083821 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -620,8 +620,8 @@ <h2>Example 3. Get potassium lab tests for patients discharged in the year 2014,
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:57:48,725 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 10:57:48,726 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.043461 s
2023-11-30 11:26:09,201 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 11:26:09,203 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.049997 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -660,8 +660,8 @@ <h2>Example 4. Get glucose medications (substring search) for female patients di
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:57:48,925 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 10:57:48,926 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.176353 s
2023-11-30 11:26:09,405 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 11:26:09,406 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.177393 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down
58 changes: 29 additions & 29 deletions tutorials/eicu.ipynb
View file
Original file line number Diff line number Diff line change
Expand Up @@ -35,10 +35,10 @@
"id": "75a140e0-fb27-4319-862f-be54397abe5c",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-30T15:57:46.342748Z",
"iopub.status.busy": "2023-11-30T15:57:46.342220Z",
"iopub.status.idle": "2023-11-30T15:57:48.479913Z",
"shell.execute_reply": "2023-11-30T15:57:48.478338Z"
"iopub.execute_input": "2023-11-30T16:26:06.818397Z",
"iopub.status.busy": "2023-11-30T16:26:06.817863Z",
"iopub.status.idle": "2023-11-30T16:26:08.941391Z",
"shell.execute_reply": "2023-11-30T16:26:08.939798Z"
},
"tags": []
},
Expand All @@ -47,7 +47,7 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-30 10:57:47,714 \u001b[1;37mINFO\u001b[0m cycquery.orm - Database setup, ready to run queries!\n"
"2023-11-30 11:26:08,130 \u001b[1;37mINFO\u001b[0m cycquery.orm - Database setup, ready to run queries!\n"
]
},
{
Expand Down Expand Up @@ -124,10 +124,10 @@
"id": "c1efa964-8978-4a0e-9892-5ea4ce9953a3",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-30T15:57:48.486858Z",
"iopub.status.busy": "2023-11-30T15:57:48.486147Z",
"iopub.status.idle": "2023-11-30T15:57:48.553084Z",
"shell.execute_reply": "2023-11-30T15:57:48.551735Z"
"iopub.execute_input": "2023-11-30T16:26:08.948224Z",
"iopub.status.busy": "2023-11-30T16:26:08.947477Z",
"iopub.status.idle": "2023-11-30T16:26:09.018743Z",
"shell.execute_reply": "2023-11-30T16:26:09.017499Z"
},
"tags": []
},
Expand All @@ -136,14 +136,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-30 10:57:48,545 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2023-11-30 11:26:09,011 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-30 10:57:48,547 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.051502 s\n"
"2023-11-30 11:26:09,013 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.054849 s\n"
]
},
{
Expand Down Expand Up @@ -180,10 +180,10 @@
"id": "a7ab5fa3-e26b-47a7-818f-1bf367a55760",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-30T15:57:48.558894Z",
"iopub.status.busy": "2023-11-30T15:57:48.558499Z",
"iopub.status.idle": "2023-11-30T15:57:48.654669Z",
"shell.execute_reply": "2023-11-30T15:57:48.653155Z"
"iopub.execute_input": "2023-11-30T16:26:09.025244Z",
"iopub.status.busy": "2023-11-30T16:26:09.024808Z",
"iopub.status.idle": "2023-11-30T16:26:09.125684Z",
"shell.execute_reply": "2023-11-30T16:26:09.124461Z"
},
"tags": []
},
Expand All @@ -192,14 +192,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-30 10:57:48,647 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2023-11-30 11:26:09,118 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-30 10:57:48,648 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.080850 s\n"
"2023-11-30 11:26:09,120 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.083821 s\n"
]
},
{
Expand Down Expand Up @@ -236,10 +236,10 @@
"id": "24043abc-1878-4e00-8229-36d4a0368b98",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-30T15:57:48.660954Z",
"iopub.status.busy": "2023-11-30T15:57:48.660433Z",
"iopub.status.idle": "2023-11-30T15:57:48.731893Z",
"shell.execute_reply": "2023-11-30T15:57:48.730734Z"
"iopub.execute_input": "2023-11-30T16:26:09.131566Z",
"iopub.status.busy": "2023-11-30T16:26:09.131046Z",
"iopub.status.idle": "2023-11-30T16:26:09.207777Z",
"shell.execute_reply": "2023-11-30T16:26:09.206592Z"
},
"tags": []
},
Expand All @@ -248,14 +248,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-30 10:57:48,725 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2023-11-30 11:26:09,201 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-30 10:57:48,726 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.043461 s\n"
"2023-11-30 11:26:09,203 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.049997 s\n"
]
},
{
Expand Down Expand Up @@ -298,10 +298,10 @@
"id": "f6142f27-e8d1-453c-bfe2-2265d9ff1914",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-30T15:57:48.738010Z",
"iopub.status.busy": "2023-11-30T15:57:48.737469Z",
"iopub.status.idle": "2023-11-30T15:57:48.932894Z",
"shell.execute_reply": "2023-11-30T15:57:48.931308Z"
"iopub.execute_input": "2023-11-30T16:26:09.214269Z",
"iopub.status.busy": "2023-11-30T16:26:09.213826Z",
"iopub.status.idle": "2023-11-30T16:26:09.411735Z",
"shell.execute_reply": "2023-11-30T16:26:09.410448Z"
},
"tags": []
},
Expand All @@ -310,14 +310,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-30 10:57:48,925 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2023-11-30 11:26:09,405 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-30 10:57:48,926 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.176353 s\n"
"2023-11-30 11:26:09,406 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.177393 s\n"
]
},
{
Expand Down
18 changes: 9 additions & 9 deletions tutorials/mimiciii.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -478,7 +478,7 @@ <h2>Imports and instantiate <code class="docutils literal notranslate"><span cla
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:57:58,196 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
2023-11-30 11:26:19,303 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -512,8 +512,8 @@ <h2>Example 1. Get all male patients with a mortality outcome.<a class="headerli
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:58:05,033 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 10:58:05,035 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.045610 s
2023-11-30 11:26:26,213 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 11:26:26,215 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.046621 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -553,8 +553,8 @@ <h2>Example 2. Get all female patient encounters with diagnoses (<code class="do
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:58:05,174 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 10:58:05,176 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.101629 s
2023-11-30 11:26:26,352 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 11:26:26,354 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.101334 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -586,8 +586,8 @@ <h2>Example 3. Get potassium lab tests for female patients.<a class="headerlink"
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:58:05,252 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 10:58:05,253 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.042548 s
2023-11-30 11:26:26,429 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 11:26:26,430 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.043237 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -624,8 +624,8 @@ <h2>Example 4. Get AaDO2 carevue chart events for male patients that have a <cod
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-30 10:59:15,015 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 10:59:15,016 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 69.718738 s
2023-11-30 11:27:35,982 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-30 11:27:35,983 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 69.519864 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down
Loading

0 comments on commit 0b8092b

Please sign in to comment.