Fixing environemtn and upgrading fastapi

.github/workflows/docs_build.yml

@@ -19,16 +19,19 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/[email protected]
-      - name: Install dependencies, build docs and coverage report
-        run: sudo apt install python3-poetry
+      - name: Install and configure Poetry
+        uses: snok/install-poetry@v1
+        with:
+          virtualenvs-create: true
+          virtualenvs-in-project: true
       - uses: actions/[email protected]
         with:
           python-version: '3.9'
           cache: 'poetry'
       - run: |
           python3 -m pip install --upgrade pip && python3 -m pip install poetry
           poetry env use '3.9'
-          source $(poetry env info --path)/bin/activate
+          source .venv/bin/activate
           poetry install --with docs,test
           cd docs && rm -rf source/reference/api/_autosummary && make html
           cd .. && coverage run -m pytest florist/tests/unit && coverage xml && coverage report -m

.github/workflows/docs_deploy.yml

@@ -24,8 +24,11 @@ jobs:
       - uses: actions/[email protected]
         with:
           submodules: 'true'
-      - name: Install dependencies, build docs and coverage report
-        run: sudo apt install python3-poetry
+      - name: Install and configure Poetry
+        uses: snok/install-poetry@v1
+        with:
+          virtualenvs-create: true
+          virtualenvs-in-project: true
       - uses: actions/[email protected]
         with:
           python-version: '3.9'

.github/workflows/integration_tests.yaml

@@ -37,8 +37,11 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/[email protected]
-      - name: Install poetry
-        run: sudo apt install python3-poetry
+      - name: Install and configure Poetry
+        uses: snok/install-poetry@v1
+        with:
+          virtualenvs-create: true
+          virtualenvs-in-project: true
       - uses: actions/[email protected]
         with:
           python-version: '3.9'
@@ -53,7 +56,7 @@ jobs:
       - name: Install dependencies and check code
         run: |
           poetry env use '3.9'
-          source $(poetry env info --path)/bin/activate
+          source .venv/bin/activate
           poetry install --with docs,test
           coverage run -m pytest florist/tests/integration && coverage xml && coverage report -m
       - name: Upload python coverage to Codecov

.github/workflows/publish.yml

@@ -13,8 +13,11 @@ jobs:
           sudo apt-get update
           sudo apt-get install libcurl4-openssl-dev libssl-dev
       - uses: actions/[email protected]
-      - name: Install poetry
-        run: sudo apt install python3-poetry
+      - name: Install and configure Poetry
+        uses: snok/install-poetry@v1
+        with:
+          virtualenvs-create: true
+          virtualenvs-in-project: true
       - uses: actions/[email protected]
         with:
           python-version: '3.9'

.github/workflows/unit_tests.yaml

@@ -37,16 +37,18 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/[email protected]
-      - name: Install poetry
-        run: sudo apt install python3-poetry
+      - name: Install and configure Poetry
+        uses: snok/install-poetry@v1
+        with:
+          virtualenvs-create: true
+          virtualenvs-in-project: true
       - uses: actions/[email protected]
         with:
           python-version: '3.9'
-          cache: 'poetry'
       - name: Install python dependencies and check code
         run: |
           poetry env use '3.9'
-          source $(poetry env info --path)/bin/activate
+          source .venv/bin/activate
           poetry install --with docs,test
           coverage run -m pytest florist/tests/unit && coverage xml && coverage report -m
       - name: Upload python coverage to Codecov

pyproject.toml

@@ -15,7 +15,7 @@ classifiers = [
 
 [tool.poetry.dependencies]
 python = ">=3.9.0,<3.11"
-fastapi = "^0.109.1"
+fastapi = "^0.115.2"
 uvicorn = {version = "^0.23.2", extras = ["standard"]}
 fl4health = "^0.1.15"
 wandb = "^0.16.3"