Add dbGaP application info to user profile

UW-GAC · Jun 18, 2024 · fecded2 · fecded2
1 parent 216c78f
commit fecded2
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diff --git a/primed/templates/users/user_detail.html b/primed/templates/users/user_detail.html
@@ -49,6 +49,7 @@ <h5><i class="bi bi-globe"></i> Study Site{% if object.study_sites.all.count > 1
       </div>
     </div>
     <div class='col'>
+
       <div class='card card-shadow-sm'>
         <div class='card-header'>
           <h3><i class="bi bi-link-45deg"></i> {% if object == request.user %}My{% else %}User{% endif %} AnVIL Account</h3>
@@ -96,6 +97,30 @@ <h5>Verified Date</h5>
           <p class='alert alert-secondary mt-3'><i class="bi bi-question-circle-fill"></i> If this is incorrect, please contact the CC at <a href="mailto:{{ DCC_CONTACT_EMAIL }}">{{ DCC_CONTACT_EMAIL }}</a></p>
         </div><i class="bi bi-c-square"></i>
       </div>
+
+      {% if object == request.user %}
+
+      <div class='card card-shadow-sm mt-3'>
+        <div class='card-header'>
+          <h3><i class="bi bi-clipboard-check"></i> My data access mechanisms </h3>
+        </div>
+        <div class='card-body'>
+          <h4>dbGaP</h4>
+          <ul class="list-group">
+            {% for app in object.pi_dbgap_applications.all %}
+            <li class="list-group-item"><strong>Principal Investigator: </strong><a href="{{ app.get_absolute_url }}">{{ app }}</a></li>
+            {% endfor %}
+            {% for app in object.collaborator_dbgap_applications.all %}
+            <li class="list-group-item"><strong>Collaborator: </strong><a href="{{ app.get_absolute_url }}">{{ app }}</a></li>
+            {% endfor %}
+
+            <p class='alert alert-secondary mt-3'><i class="bi bi-question-circle-fill"></i> If this is incorrect, please contact the CC at <a href="mailto:{{ DCC_CONTACT_EMAIL }}">{{ DCC_CONTACT_EMAIL }}</a></p>
+          </ul>
+        </div>
+      </div>
+
+      {% endif %}
+
     </div>
   </div>
 

diff --git a/primed/users/tests/test_views.py b/primed/users/tests/test_views.py
@@ -16,6 +16,7 @@
 from django.test import RequestFactory, TestCase
 from django.urls import reverse
 
+from primed.dbgap.tests.factories import dbGaPApplicationFactory
 from primed.primed_anvil.tests.factories import StudySiteFactory
 from primed.users.forms import UserChangeForm
 from primed.users.models import User
@@ -183,6 +184,85 @@ def test_view_links(self, client, user: User, rf: RequestFactory):
         assert account.get_absolute_url() not in str(response.content)
 
 
+class UserDetailTest(TestCase):
+    def setUp(self):
+        self.factory = RequestFactory()
+        self.user = UserFactory.create()
+
+    def test_data_access_my_profile(self):
+        self.client.force_login(self.user)
+        response = self.client.get(self.user.get_absolute_url())
+        self.assertEqual(response.status_code, 200)
+        self.assertContains(response, "My data access mechanisms")
+        self.assertContains(response, "dbGaP")
+
+    def test_data_access_other_profile(self):
+        other_user = UserFactory.create()
+        self.client.force_login(self.user)
+        response = self.client.get(other_user.get_absolute_url())
+        self.assertEqual(response.status_code, 200)
+        self.assertNotContains(response, "My data access mechanisms")
+
+    def test_pi_of_one_dbgap_application(self):
+        dbgap_application = dbGaPApplicationFactory.create(principal_investigator=self.user)
+        self.client.force_login(self.user)
+        response = self.client.get(self.user.get_absolute_url())
+        self.assertEqual(response.status_code, 200)
+        self.assertContains(response, "Principal Investigator")
+        self.assertContains(response, dbgap_application.dbgap_project_id)
+        self.assertContains(response, dbgap_application.get_absolute_url())
+
+    def test_pi_of_two_dbgap_applications(self):
+        dbgap_application_1 = dbGaPApplicationFactory.create(principal_investigator=self.user)
+        dbgap_application_2 = dbGaPApplicationFactory.create(principal_investigator=self.user)
+        self.client.force_login(self.user)
+        response = self.client.get(self.user.get_absolute_url())
+        self.assertEqual(response.status_code, 200)
+        self.assertContains(response, "Principal Investigator")
+        self.assertContains(response, dbgap_application_1.dbgap_project_id)
+        self.assertContains(response, dbgap_application_1.get_absolute_url())
+        self.assertContains(response, dbgap_application_2.dbgap_project_id)
+        self.assertContains(response, dbgap_application_2.get_absolute_url())
+
+    def test_collaborator_on_one_dbgap_application(self):
+        dbgap_application = dbGaPApplicationFactory.create()
+        dbgap_application.collaborators.add(self.user)
+        self.client.force_login(self.user)
+        response = self.client.get(self.user.get_absolute_url())
+        self.assertEqual(response.status_code, 200)
+        self.assertContains(response, "Collaborator")
+        self.assertContains(response, dbgap_application.dbgap_project_id)
+        self.assertContains(response, dbgap_application.get_absolute_url())
+
+    def test_collaborator_on_two_dbgap_applications(self):
+        dbgap_application_1 = dbGaPApplicationFactory.create()
+        dbgap_application_1.collaborators.add(self.user)
+        dbgap_application_2 = dbGaPApplicationFactory.create()
+        dbgap_application_2.collaborators.add(self.user)
+        self.client.force_login(self.user)
+        response = self.client.get(self.user.get_absolute_url())
+        self.assertEqual(response.status_code, 200)
+        self.assertContains(response, "Collaborator")
+        self.assertContains(response, dbgap_application_1.dbgap_project_id)
+        self.assertContains(response, dbgap_application_1.get_absolute_url())
+        self.assertContains(response, dbgap_application_2.dbgap_project_id)
+        self.assertContains(response, dbgap_application_2.get_absolute_url())
+
+    def test_dbgap_pi_and_collaborator(self):
+        dbgap_application_1 = dbGaPApplicationFactory.create(principal_investigator=self.user)
+        dbgap_application_2 = dbGaPApplicationFactory.create()
+        dbgap_application_2.collaborators.add(self.user)
+        self.client.force_login(self.user)
+        response = self.client.get(self.user.get_absolute_url())
+        self.assertEqual(response.status_code, 200)
+        self.assertContains(response, "Principal Investigator")
+        self.assertContains(response, "Collaborator")
+        self.assertContains(response, dbgap_application_1.dbgap_project_id)
+        self.assertContains(response, dbgap_application_1.get_absolute_url())
+        self.assertContains(response, dbgap_application_2.dbgap_project_id)
+        self.assertContains(response, dbgap_application_2.get_absolute_url())
+
+
 class UserAutocompleteTest(TestCase):
     def setUp(self):
         """Set up test class."""