Merge pull request #840 from UW-GAC/dependabot/pip/pyjwt-2.10.0 #1525
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| name: CI | |
| # Enable Buildkit and let compose use it to speed up image building | |
| env: | |
| DOCKER_BUILDKIT: 1 | |
| COMPOSE_DOCKER_CLI_BUILD: 1 | |
| on: | |
| pull_request: | |
| branches: [ "main" ] | |
| paths-ignore: [ "docs/**" ] | |
| push: | |
| branches: [ "main" ] | |
| paths-ignore: [ "docs/**" ] | |
| concurrency: | |
| group: ${{ github.head_ref || github.run_id }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.10"] | |
| backend: ["sqlite", "mariadb"] | |
| mariadb-version: ["10.6"] | |
| include: | |
| - python-version: 3.12 # Future ubuntu 24.04.01 upgrade. | |
| backend: "mariadb" | |
| mariadb-version: "10.11" | |
| pip-recompile: true | |
| name: "py${{ matrix.python-version }}-${{ matrix.backend }}-${{ matrix.mariadb-version }}" | |
| services: | |
| mysql: | |
| # Always start mariadb, even if we are testing with the mysql backend. | |
| # Github actions do not allow conditional services yet. | |
| image: mariadb:${{ matrix.mariadb-version }} | |
| ports: | |
| - 3306:3306 | |
| env: | |
| MYSQL_ROOT_PASSWORD: root | |
| options: --tmpfs /var/lib/mysql | |
| env: | |
| PYTEST_ADDOPTS: "--maxfail=20" # Stop testing after too many failures. | |
| # Conditionally set the database url based on the backend. | |
| DATABASE_URL: ${{ matrix.backend == 'sqlite' && 'sqlite:///db.sqlite3' || 'mysql://root:[email protected]:3306/mysql' }} | |
| steps: | |
| - name: Checkout Code Repository | |
| uses: actions/[email protected] | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/[email protected] | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| cache-dependency-path: | | |
| requirements/requirements.txt | |
| requirements/test-requirements.txt | |
| - name: Ensure pip is installed | |
| run: | | |
| python -m ensurepip --upgrade | |
| python -m pip install --upgrade pip | |
| # Upgrade setup tools | |
| python -m pip install --upgrade setuptools | |
| - name: Install piptools | |
| run: python -m pip install pip-tools | |
| - name: Recompile pip files if requested | |
| if: matrix.pip-recompile | |
| run: | | |
| pip-compile -v requirements/requirements.in | |
| pip-compile -v requirements/test-requirements.in | |
| # Print out changes. | |
| git diff | |
| - name: Install Dependencies | |
| run: | | |
| pip-sync requirements/requirements.txt requirements/test-requirements.txt | |
| - name: Collect staticfiles | |
| run: python manage.py collectstatic --noinput --settings=config.settings.test | |
| - name: Run tests | |
| run: | | |
| pytest --cov=primed -n auto | |
| mv .coverage coverage-${{ strategy.job-index }} | |
| - name: List files for debugging purposes | |
| run: ls -lhta | |
| - name: Upload coverage data | |
| uses: actions/[email protected] | |
| with: | |
| name: coverage-data-${{ strategy.job-index }} | |
| path: coverage-${{ strategy.job-index }} | |
| if-no-files-found: error | |
| coverage: | |
| needs: | |
| - test | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out the repo | |
| uses: actions/[email protected] | |
| - name: Set up Python | |
| uses: actions/[email protected] | |
| with: | |
| python-version: '3.10' | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --upgrade coverage "django<4" django-coverage-plugin | |
| - name: Download coverage data | |
| uses: actions/[email protected] | |
| with: | |
| path: ./artifacts/ | |
| - name: Merge coverage files | |
| run: | | |
| ls -la ./artifacts/coverage-data* | |
| python -m coverage combine ./artifacts/coverage-data*/coverage-* | |
| python -m coverage xml | |
| ls -la .coverage* | |
| - name: Report coverage | |
| run: | | |
| python -m coverage report | |
| - name: Upload coverage to Codecov | |
| uses: codecov/[email protected] | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} |