Merge branch 'master' into external_samplers_docs

TuringLang · Sep 20, 2023 · 1009fe5 · 1009fe5
2 parents 32284d5 + 0eb54db
commit 1009fe5
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diff --git a/.buildkite/build_tutorial.sh b/.buildkite/build_tutorial.sh
@@ -0,0 +1,10 @@
+#!/bin/bash
+
+set -euo pipefail
+
+echo "--- Instantiate"
+julia --project=. -e 'using Pkg; Pkg.instantiate(); Pkg.build()'
+
+# Run tutorial
+echo "+++ Run tutorial for ${1}"
+julia --project=. weave_tutorials.jl "${1}"
diff --git a/.buildkite/launch_tutorials.yml.signature b/.buildkite/launch_tutorials.yml.signature
diff --git a/.buildkite/run_tutorial.yml b/.buildkite/run_tutorial.yml
@@ -15,8 +15,8 @@ steps:
     plugins:
       - staticfloat/cryptic#v2:
           variables:
-            - BUILDKITE_S3_ACCESS_KEY_ID="U2FsdGVkX1/ckce1vUF8A17rHLxcAlAou4aokaeS8YL6omsA1Vq1IDZko5cL1Z+t"
-            - BUILDKITE_S3_SECRET_ACCESS_KEY="U2FsdGVkX1+SPF81nkK7KQ64DsafSl0qq2iG7BsQs1xlTYEtZV3MqQl3l/NWaiocaEywZZFbAB5zpnKPD0xHTQ=="
+            - BUILDKITE_S3_ACCESS_KEY_ID="U2FsdGVkX1+WPOr26vcEpOV6IfWQ/wwzUGjFRYux1AFtQjongCK2rnzySL6mkLdR"
+            - BUILDKITE_S3_SECRET_ACCESS_KEY="U2FsdGVkX19cbtDEWMwL+gpAtByCS8SJzX0hZ6qZ68L2bfjgAWJhbkb14T9uNwJZgKzWymvy0G9LwnJD/0VQ+Q=="
             - BUILDKITE_S3_DEFAULT_REGION="U2FsdGVkX1/cORlxhXcxhja2JkqC0f8RmaGYxvGBbEg="
       - JuliaCI/julia#v1:
           version: 1
@@ -44,20 +44,16 @@ steps:
           s3_prefix: s3://julialang-buildkite-artifacts/turingtutorials
     timeout_in_minutes: 360
     commands: |
-      # Instantiate, to install the overall project dependencies
-      echo "--- Instantiate"
-      julia --project=. -e 'using Pkg; Pkg.instantiate(); Pkg.build()'
-      # Run tutorial
-      echo "+++ Run tutorial for {PATH}"
-      julia --project=. weave_tutorials.jl "{PATH}"
+      # We don't need these secrets at this point, so clear them out so they don't show up in debugging outputs
+      BUILDKITE_S3_ACCESS_KEY_ID="" BUILDKITE_S3_SECRET_ACCESS_KEY="" ./.buildkite/build_tutorial.sh {PATH}
   - label: ":rocket: Publish {PATH}"
     env:
       BUILDKITE_PLUGIN_CRYPTIC_BASE64_SIGNED_JOB_ID_SECRET: ${BUILDKITE_PLUGIN_CRYPTIC_BASE64_SIGNED_JOB_ID_SECRET?}
     plugins:
       - staticfloat/cryptic#v2:
           variables:
-            - BUILDKITE_S3_ACCESS_KEY_ID="U2FsdGVkX1/ckce1vUF8A17rHLxcAlAou4aokaeS8YL6omsA1Vq1IDZko5cL1Z+t"
-            - BUILDKITE_S3_SECRET_ACCESS_KEY="U2FsdGVkX1+SPF81nkK7KQ64DsafSl0qq2iG7BsQs1xlTYEtZV3MqQl3l/NWaiocaEywZZFbAB5zpnKPD0xHTQ=="
+            - BUILDKITE_S3_ACCESS_KEY_ID="U2FsdGVkX1+WPOr26vcEpOV6IfWQ/wwzUGjFRYux1AFtQjongCK2rnzySL6mkLdR"
+            - BUILDKITE_S3_SECRET_ACCESS_KEY="U2FsdGVkX19cbtDEWMwL+gpAtByCS8SJzX0hZ6qZ68L2bfjgAWJhbkb14T9uNwJZgKzWymvy0G9LwnJD/0VQ+Q=="
             - BUILDKITE_S3_DEFAULT_REGION="U2FsdGVkX1/cORlxhXcxhja2JkqC0f8RmaGYxvGBbEg="
           files:
             - .buildkite/ssh_deploy.key

diff --git a/.github/workflows/UpdateManifests.yml b/.github/workflows/UpdateManifests.yml
@@ -21,7 +21,7 @@ jobs:
           version: 1
       - uses: julia-actions/cache@v1
       - name: "Update Manifest.toml files"
-        run: find tutorials/ -type f -name Manifest.toml -exec julia --color=yes -e "using Pkg; Pkg.activate(dirname(ARGS[1])); Pkg.instantiate(); Pkg.update()'" {} \;
+        run: find tutorials/ -type f -name Manifest.toml -exec julia --color=yes -e "using Pkg; Pkg.activate(dirname(ARGS[1])); Pkg.instantiate(); Pkg.update()" {} \;
       - run: git status
       - uses: peter-evans/create-pull-request@v4
         with:

diff --git a/tutorials/00-introduction/00_introduction.jmd b/tutorials/00-introduction/00_introduction.jmd
@@ -179,7 +179,7 @@ rand(coinflip(; N))
 ```
 
 The model can be conditioned on some observations with `|`.
-See the [documentation of the `condition` syntax](https://turinglang.github.io/DynamicPPL.jl/stable/api/#Condition-and-decondition) in DynamicPPL.jl for more details.
+See the [documentation of the `condition` syntax](https://turinglang.github.io/DynamicPPL.jl/stable/api/#Condition-and-decondition) in `DynamicPPL.jl` for more details.
 In the conditioned `model` the observations `y` are fixed to `data`.
 
 ```julia