Add raytracing image to readme #74
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| ## ----------------------------------------------------------------------------- | |
| ## | |
| ## Copyright (C) 2022 CERN, TUM, and UT Austin. All Rights Reserved. | |
| ## | |
| ## Licensed under the Apache License, Version 2.0 (the "License"); | |
| ## you may not use this file except in compliance with the License. | |
| ## | |
| ## See the LICENSE file distributed with this work for details. | |
| ## See the NOTICE file distributed with this work for additional information | |
| ## regarding copyright ownership. | |
| ## | |
| ## Authored by: Tobias Duswald, CERN, TUM | |
| ## | |
| ## ----------------------------------------------------------------------------- | |
| name: ubuntu-ci | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| types: [opened, synchronize, reopened, edited] | |
| jobs: | |
| build: | |
| name: Build simulation, run it, and run unit tests | |
| strategy: | |
| matrix: | |
| os: [ubuntu-20.04] | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 20 | |
| steps: | |
| - name: Checkout this repository | |
| uses: actions/checkout@v2 | |
| - name: Install BioDynaMo dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libopenmpi-dev libomp5 libomp-dev libnuma-dev freeglut3-dev \ | |
| libreadline-dev libsqlite3-dev tk-dev python-openssl ninja-build | |
| curl -L -O https://github.com/Kitware/CMake/releases/download/v3.19.3/cmake-3.19.3-Linux-x86_64.sh | |
| chmod +x cmake-3.19.3-Linux-x86_64.sh | |
| sudo ./cmake-3.19.3-Linux-x86_64.sh --skip-license --prefix=/usr/local | |
| sudo apt-get install -y libssl-dev zlib1g-dev libbz2-dev libreadline-dev \ | |
| libsqlite3-dev xz-utils tk-dev libffi-dev liblzma-dev python-openssl libblas-dev liblapack-dev | |
| - name: Start Xvfb | |
| run: | | |
| set -e | |
| sudo apt update | |
| sudo apt-get -y install xvfb | |
| XVFBARGS=":99 -ac -screen 0 2560x1440x24" | |
| /usr/bin/Xvfb $XVFBARGS >> /tmp/Xvfb.out 2>&1 & | |
| disown -ar | |
| sleep 3 | |
| - name: Install BioDynaMo | |
| run: | | |
| if [ ! -f "$HOME/.pyenv/bin/pyenv" ]; then | |
| curl https://pyenv.run | bash | |
| fi | |
| export PATH="$HOME/.pyenv/bin:$PATH" | |
| eval "$(pyenv init --path)" | |
| eval "$(pyenv init -)" | |
| PYTHON_CONFIGURE_OPTS="--enable-shared" pyenv install 3.9.1 | |
| pyenv shell 3.9.1 | |
| cd .. | |
| git clone https://github.com/BioDynaMo/biodynamo.git | |
| cd biodynamo | |
| cmake -G Ninja \ | |
| -Dparaview=off \ | |
| -Dbenchmark=off \ | |
| -Dnotebooks=off \ | |
| -Dvalgrind=off \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -B build | |
| cmake --build build --parallel --config Release | |
| - name: Build angiogenesis simulation and run small simulation | |
| run: | | |
| . ../biodynamo/build/bin/thisbdm.sh | |
| export DISPLAY=:99.0 | |
| sed -i 's/"total_sim_time": 100000/"total_sim_time": 500/' bdm.json | |
| bdm run | |
| - name: Test angiogenesis simulation with unit tests | |
| run: | | |
| . ../biodynamo/build/bin/thisbdm.sh | |
| export DISPLAY=:99.0 | |
| bdm test |